Evidence map›Paper›PMID 18310342›Full record

ArticleJournal of bacteriology2008

Functional mapping of an oligomeric autotransporter adhesin of Aggregatibacter actinomycetemcomitans.

Chunxiao Yu, Teresa Ruiz, Christopher Lenox, Keith P Mintz

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
4.9field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. The serotype a-EmaA adhesin ofMicrobiology (Reading, England) · 2022
    Article
  7. Review
  8. Article
  9. A Nonfimbrial Adhesin ofInfection and immunity · 2019
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
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  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Chunxiao YuDepartment of Microbiology and Molecular Genetics, University of Vermont, Burlington, VT 05405, USA.
Teresa Ruiz
Christopher Lenox
Keith P Mintz
University of Vermont · US

Funding

Molecular Interactions: Oral Bacteria & Matrix ProteinsR01DE013824 · NIDCR · UNIVERSITY OF VERMONT &ST AGRIC COLLEGE · PI MINTZ, KEITH PETER · 2001 to 2010
$2.9M
NIDCR NIH HHS R01 DE013824NIDCR NIH HHS R01-DE13824
6 · The paper itself

Abstract

Extracellular matrix protein adhesin A (EmaA) is a 202-kDa nonfimbrial adhesin, which mediates the adhesion of the oral pathogen Aggregatibacter actinomycetemcomitans to collagen. EmaA oligomers form surface antenna-like protrusions consisting of a long helical rod with an ellipsoidal ending. The functional analysis of in-frame emaA deletion mutants has located the collagen binding activity to the amino terminus of the protein corresponding to amino acids 70 to 386. The level of collagen binding of this deletion mutant was comparable to the emaA mutant strain. Transmission electron microscopy studies indicate that the first 330 amino acids of the mature protein form the ellipsoidal ending of the EmaA protrusions, where the activity resides. Amino acid substitution analysis within this sequence has identified a critical amino acid, which is essential for the formation of the ellipsoidal ending and for collagen binding activity.

Indexed as

Bacterial AdhesionAdhesins, BacterialAmino Acid SequenceAmino Acid SubstitutionBinding SitesCollagen Type VConsensus SequenceDNA Mutational AnalysisMicroscopy, Electron, TransmissionMolecular Sequence DataPasteurellaceaeProtein Structure, TertiarySequence DeletionAdhesins, BacterialCollagen Type V

Identifiers

PMID18310342
PMCPMC2347400
OpenAlexW2118889285

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.