Evidence map›Paper›PMID 18308931›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2008

Distinctive microRNA signature of acute myeloid leukemia bearing cytoplasmic mutated nucleophosmin.

Ramiro Garzon, Michela Garofalo, Maria Paola Martelli, Roger Briesewitz, Lisheng Wang, Cecilia Fernandez-Cymering, Stefano Volinia, Chang-Gong Liu, Susanne Schnittger, Torsten Haferlach and 9 more

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 250 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
250citing papers in PubMed, 1 pooled it
20.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

250 citing papers in PubMed, 1 synthesis or guideline pooled it, 496 citations in OpenAlex.

  1. Pooled it
  2. Expression and prognostic impact of lncRNAs in acute myeloid leukemia.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Trial
  3. TET2 mutations improve the new European LeukemiaNet risk classification of acute myeloid leukemia: a Cancer and Leukemia Group B study.Journal of clinical oncology : official journal of the American Society of Clinical Oncology · 2011
    Trial
  4. Article
  5. Review
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  8. Article
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  11. How MicroRNAs Command the Battle against Cancer.International journal of molecular sciences · 2024
    Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. Review
  17. Article
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190 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

19 authors at 5 institutions in 3 countries.

Ramiro GarzonDepartments of Medicine and Molecular Virology and Human Genetics, Comprehensive Cancer Center, and College of Pharmacology, Ohio State University, Columbus, OH 43221, USA.
Michela Garofalo
Maria Paola Martelli
Roger Briesewitz
Lisheng Wang
Cecilia Fernandez-Cymering
Stefano Volinia
Chang-Gong Liu
Susanne Schnittger
Torsten Haferlach
Arcangelo Liso
Daniela Diverio
Marco Mancini
Giovanna Meloni
Robin Foa
Massimo F Martelli
Cristina Mecucci
Carlo M Croce
Brunangelo Falini
The Ohio State University · USSapienza University of Rome · ITUniversity of Perugia · ITMunich Leukemia Laboratory (Germany) · DEUniversity of Foggia · IT

Funding

Tissue CoreP01CA081534 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI KIPPS, THOMAS J · 2000 to 2016
$59.5M
Structural Analysis of TCL-1 and MTCP-1 ProteinsP01CA076259 · NCI · THOMAS JEFFERSON UNIVERSITY · PI CROCE, CARLO M · 1999 to 2003
$6.1M
NCI NIH HHS P01 CA076259NCI NIH HHS P01 CA081534NCI NIH HHS P01CA76259NCI NIH HHS P01CA81534
6 · The paper itself

Abstract

Acute myeloid leukemia (AML) carrying NPM1 mutations and cytoplasmic nucleophosmin (NPMc+ AML) accounts for about one-third of adult AML and shows distinct features, including a unique gene expression profile. MicroRNAs (miRNAs) are small noncoding RNAs of 19-25 nucleotides in length that have been linked to the development of cancer. Here, we investigated the role of miRNAs in the biology of NPMc+ AML. The miRNA expression was evaluated in 85 adult de novo AML patients characterized for subcellular localization/mutation status of NPM1 and FLT3 mutations using a custom microarray platform. Data were analyzed by using univariate t test within BRB tools. We identified a strong miRNA signature that distinguishes NPMc+ mutated (n = 55) from the cytoplasmic-negative (NPM1 unmutated) cases (n = 30) and includes the up-regulation of miR-10a, miR-10b, several let-7 and miR-29 family members. Many of the down-regulated miRNAs including miR-204 and miR-128a are predicted to target several HOX genes. Indeed, we confirmed that miR-204 targets HOXA10 and MEIS1, suggesting that the HOX up-regulation observed in NPMc+ AML may be due in part by loss of HOX regulators-miRNAs. FLT3-ITD+ samples were characterized by up-regulation of miR-155. Further experiments demonstrated that the up-regulation of miR-155 was independent from FLT3 signaling. Our results identify a unique miRNA signature associated with NPMc+ AML and provide evidence that support a role for miRNAs in the regulation of HOX genes in this leukemia subtype. Moreover, we found that miR-155 was strongly but independently associated with FLT3-ITD mutations.

Indexed as

Antigens, CD34Cell Line, TumorCluster AnalysisCytoplasmfms-Like Tyrosine Kinase 3Gene Expression ProfilingGene Expression Regulation, LeukemicHomeobox A10 ProteinsHomeodomain ProteinsHumansLeukemia, Myeloid, AcuteMicroRNAsMutant ProteinsMutationMyeloid Ecotropic Viral Integration Site 1 ProteinNeoplasm ProteinsAntigens, CD34fms-Like Tyrosine Kinase 3Homeobox A10 ProteinsHomeodomain ProteinsHOXA10 protein, humanHOXB4 protein, humanMEIS1 protein, humanMicroRNAsMutant ProteinsMyeloid Ecotropic Viral Integration Site 1 ProteinNeoplasm ProteinsNPM1 protein, humanNuclear ProteinsNucleophosminTranscription Factors

Identifiers

PMID18308931
PMCPMC2268779
OpenAlexW2123680400

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.