Evidence map›Paper›PMID 18307782›Full record

ArticleBMC plant biology2008

AtMRP6/AtABCC6, an ATP-binding cassette transporter gene expressed during early steps of seedling development and up-regulated by cadmium in Arabidopsis thaliana.

Stéphane Gaillard, Hélène Jacquet, Alain Vavasseur, Nathalie Leonhardt, Cyrille Forestier

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 101 citations in OpenAlex.

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  15. Genome-Wide Analysis of the ATP-Binding Cassette (ABC) Transporter Family inInternational journal of molecular sciences · 2022
    Article
  16. Article
  17. Review
  18. Recent advances in physiological and molecular mechanisms of heavy metal accumulation in plants.Environmental science and pollution research international · 2021
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 1 country.

Stéphane GaillardCEA, DSV, IBEB, Lab Echanges Membranaires & Signalisation, Saint-Paul-lez-Durance, F-13108, France. sgaillard@ibdml.univ-mrs.fr
Hélène Jacquet
Alain Vavasseur
Nathalie Leonhardt
Cyrille Forestier
Centre National de la Recherche Scientifique · FRAix-Marseille Université · FRCEA Cadarache · FRCommissariat à l'Énergie Atomique et aux Énergies Alternatives · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundABC proteins constitute one of the largest families of transporters found in all living organisms. In Arabidopsis thaliana, 120 genes encoding ABC transporters have been identified. Here, the characterization of one member of the MRP subclass, AtMRP6, is described.

resultsThis gene, located on chromosome 3, is bordered by AtMRP3 and AtMRP7. Using real-time quantitative PCR (RT-Q-PCR) and the GUS reporter gene, we found that this gene is essentially expressed during early seedling development, in the apical meristem and at initiation point of secondary roots, especially in xylem-opposite pericycle cells where lateral roots initiate. The level of expression of AtMRP6 in response to various stresses was explored and a significant up-regulation after cadmium (Cd) treatment was detected. Among the three T-DNA insertion lines available from the Salk Institute library, two knock-out mutants, Atmrp6.1 and Atmrp6.2 were invalidated for the AtMRP6 gene. In the presence of Cd, development of leaves was more affected in the mutants than wild-type plants, whereas root elongation and ramification was comparable.

conclusionThe position of AtMRP6 on chromosome 3, flanked by two other MRP genes, (all of which being induced by Cd) suggests that AtMRP6 is part of a cluster involved in metal tolerance, although additional functions in planta cannot be discarded.

Indexed as

ArabidopsisArabidopsis ProteinsATP-Binding Cassette, Sub-Family C ProteinsATP-Binding Cassette TransportersCadmiumCell LineDNA, ComplementaryDNA, PlantGene DeletionGene Expression Regulation, PlantHumansMultigene FamilySaccharomyces cerevisiaeSeedlingsUp-RegulationArabidopsis ProteinsATP-Binding Cassette, Sub-Family C ProteinsATP-Binding Cassette TransportersCadmiumDNA, ComplementaryDNA, PlantMRP6 protein, Arabidopsis

Identifiers

PMID18307782
PMCPMC2291051
OpenAlexW2092898295

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.