Evidence map›Paper›PMID 18305338›Full record

ArticleJournal of genetics2007

Genetic variation and population structure of interleukin genes among seven ethnic populations from Karnataka, India.

Srilakshmi M Raj, Diddahally R Govindaraju, Ranajit Chakraborty

Abstract read
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Article in Journal of genetics, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact, top 85% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 11 citations in OpenAlex.

  1. Frequency ofMediators of inflammation · 2016
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4 · The record

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5 · Who and what money

Authors and funding

3 authors at 3 institutions in 2 countries.

Srilakshmi M RajSt. John's College, Oxford University, Oxford, UK. drgraju@bu.edu
Diddahally R Govindaraju
Ranajit Chakraborty
University of Cincinnati · USUniversity of Oxford · GBUniversity School · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The extent of genetic variation and the degree of genetic differentiation among seven ethnic populations from Karnataka, India (Bunt, Havyak, Iyengar, Lingayath, Smartha, Vaishya, Vokkaliga), was investigated using four single nucleotide polymorphisms (SNPs: IL-1A 4845, IL-1B 3954, IL-1B 511 and IL-1RA 2018) of the interleukin gene cluster. Allele frequencies varied by threefold among these populations, which also differed for gene diversity and heterozygosity levels. The average degree of population subdivision among these castes was low (F(ST) = 0.02). However, pair-wise interpopulation differentiation ranged from 0-7%, indicating no detectable differentiation to moderate differentiation between specific populations. The results of phylogenetic analysis based on genetic distances between populations agreed with known social and cultural data on these ethnic groups. Variation in the allele frequencies, as well as differentiation, may be attributed to differential selection and demographic factors including consanguinity among the ethnic groups. Information on the distribution of functionally relevant polymorphisms among ethnic populations may be important towards developing community medicine and public health policies.

Indexed as

AllelesEthnicityFemaleGene FrequencyGenetic VariationHeterozygoteHumansIndiaInterleukinsMaleMultigene FamilyPolymorphism, Single NucleotideInterleukins

Identifiers

PMID18305338
OpenAlexW1974640979

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.