ArticleBMC evolutionary biology2008
Comparative genome mapping of the deer mouse (Peromyscus maniculatus) reveals greater similarity to rat (Rattus norvegicus) than to the lab mouse (Mus musculus).
Article in BMC evolutionary biology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.
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Who cites it
22 citing papers in PubMed, 35 citations in OpenAlex.
- Physiological Evidence for Delayed Age-related Hearing Loss in Two Long-lived Rodent Species (Peromyscus leucopus and P. californicus).Journal of the Association for Research in Otolaryngology : JARO · 2022Article
- Natural rodent model of viral transmission reveals biological features of virus population dynamics.The Journal of experimental medicine · 2022Article
- An updated genetic map of Peromyscus with chromosomal assignment of linkage groups.Mammalian genome : official journal of the International Mammalian Genome Society · 2018Article
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- Modeling Powassan virus infection in Peromyscus leucopus, a natural host.PLoS neglected tropical diseases · 2017Article
- Interferon signaling in Peromyscus leucopus confers a potent and specific restriction to vector-borne flaviviruses.PloS one · 2017Article
- The genetic basis and fitness consequences of sperm midpiece size in deer mice.Nature communications · 2016Article
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- Article
- Transcriptome resources for the white-footed mouse (Peromyscus leucopus): new genomic tools for investigating ecologically divergent urban and rural populations.Molecular ecology resources · 2015Article
- Differential lymphocyte and antibody responses in deer mice infected with Sin Nombre hantavirus or Andes hantavirus.Journal of virology · 2014Article
- A genetic map of Peromyscus with chromosomal assignment of linkage groups (a Peromyscus genetic map).Mammalian genome : official journal of the International Mammalian Genome Society · 2014Article
- Sex differences in stress-induced social withdrawal: role of brain derived neurotrophic factor in the bed nucleus of the stria terminalis.Frontiers in behavioral neuroscience · 2013Article
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- Double digest RADseq: an inexpensive method for de novo SNP discovery and genotyping in model and non-model species.PloS one · 2012Article
- Late replicating domains are highly recombining in females but have low male recombination rates: implications for isochore evolution.PloS one · 2011Article
- Aberrant growth and pattern formation in Peromyscus hybrid placental development.Biology of reproduction · 2010Article
- Five Hundred Microsatellite Loci for Peromyscus.Conservation genetics (Print) · 2010Article
- Development of genomic resources for the prairie vole (Microtus ochrogaster): construction of a BAC library and vole-mouse comparative cytogenetic map.BMC genomics · 2010Article
- Evidence that replication-associated mutation alone does not explain between-chromosome differences in substitution rates.Genome biology and evolution · 2009Article
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Authors and funding
6 authors at 4 institutions in 1 country.
Funding
Abstract
backgroundDeer mice (Peromyscus maniculatus) and congeneric species are the most common North American mammals. They represent an emerging system for the genetic analyses of the physiological and behavioral bases of habitat adaptation. Phylogenetic evidence suggests a much more ancient divergence of Peromyscus from laboratory mice (Mus) and rats (Rattus) than that separating latter two. Nevertheless, early karyotypic analyses of the three groups suggest Peromyscus to be exhibit greater similarities with Rattus than with Mus.
resultsComparative linkage mapping of an estimated 35% of the deer mouse genome was done with respect to the Rattus and Mus genomes. We particularly focused on regions that span synteny breakpoint regions between the rat and mouse genomes. The linkage analysis revealed the Peromyscus genome to have a higher degree of synteny and gene order conservation with the Rattus genome.
conclusionThese data suggest that: 1. the Rattus and Peromyscus genomes more closely represent ancestral Muroid and rodent genomes than that of Mus. 2. the high level of genome rearrangement observed in Muroid rodents is especially pronounced in Mus. 3. evolution of genome organization can operate independently of more commonly assayed measures of genetic change (e.g. SNP frequency).
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.