Evidence map›Paper›PMID 18299390›Full record

ArticleMolecular and cellular biology2008

The transcriptional coactivator SAYP is a trithorax group signature subunit of the PBAP chromatin remodeling complex.

Gillian E Chalkley, Yuri M Moshkin, Karin Langenberg, Karel Bezstarosti, Andras Blastyak, Henrik Gyurkovics, Jeroen A A Demmers, C Peter Verrijzer

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 81 citations in OpenAlex.

  1. Review
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  6. Polycomb Recruiters Inside and Outside of the Repressed Domains.International journal of molecular sciences · 2023
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  11. Pilot RNAi Screen inInternational journal of molecular sciences · 2021
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  14. GAGA factor: a multifunctional pioneering chromatin protein.Cellular and molecular life sciences : CMLS · 2021
    Review
  15. Article
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  17. Article
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 3 countries.

Gillian E ChalkleyDepartment of Biochemistry, Center for Biomedical Genetics, Erasmus University Medical Center, P.O. Box 1738, 3000 DR Rotterdam, The Netherlands.
Yuri M Moshkin
Karin Langenberg
Karel Bezstarosti
Andras Blastyak
Henrik Gyurkovics
Jeroen A A Demmers
C Peter Verrijzer
Center for Human Genetics · USErasmus MC · NLHungarian Academy of Sciences · HUInstitute of Genetics · HU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

SWI/SNF ATP-dependent chromatin remodeling complexes (remodelers) perform critical functions in eukaryotic gene expression control. BAP and PBAP are the fly representatives of the two evolutionarily conserved major subclasses of SWI/SNF remodelers. Both complexes share seven core subunits, including the Brahma ATPase, but differ in a few signature subunits; POLYBROMO and BAP170 specify PBAP, whereas OSA defines BAP. Here, we show that the transcriptional coactivator and PHD finger protein SAYP is a novel PBAP subunit. Biochemical analysis established that SAYP is tightly associated with PBAP but absent from BAP. SAYP, POLYBROMO, and BAP170 display an intimately overlapping distribution on larval salivary gland polytene chromosomes. Genome-wide expression analysis revealed that SAYP is critical for PBAP-dependent transcription. SAYP is required for normal development and interacts genetically with core- and PBAP-selective subunits. Genetic analysis suggested that, like BAP, PBAP also counteracts Polycomb silencing. SAYP appears to be a key architectural component required for the integrity and association of the PBAP-specific module. We conclude that SAYP is a signature subunit that plays a major role in the functional specificity of the PBAP holoenzyme.

Indexed as

AnimalsCells, CulturedChromatin Assembly and DisassemblyDrosophila melanogasterDrosophila ProteinsEmbryo, NonmammalianLarvaProtein SubunitsSalivary GlandsTranscription FactorsTranscription, GeneticBAP170 protein, DrosophilaDrosophila Proteinse(y)3 protein, DrosophilaProtein SubunitsTranscription Factors

Identifiers

PMID18299390
PMCPMC2293093
OpenAlexW2158285204

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.