Evidence map›Paper›PMID 18299332›Full record

ArticleThe Journal of biological chemistry2008

Six peptide wound signals derived from a single precursor protein in Ipomoea batatas leaves activate the expression of the defense gene sporamin.

Yu-Chi Chen, William F Siems, Gregory Pearce, Clarence A Ryan

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed.

  1. Article
  2. Review
  3. Peptide hormones in plants.Molecular horticulture · 2025
    Review
  4. Review
  5. Influences ofCurrent protein & peptide science · 2024
    Article
  6. Article
  7. Plant Responses to Herbivory, Wounding, and Infection.International journal of molecular sciences · 2022
    Review
  8. Review
  9. Article
  10. Review
  11. Article
  12. Review
  13. Review
  14. Article
  15. Article
  16. Review
  17. Article
  18. Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Yu-Chi ChenInstitute of Biological Chemistry, Washington State University, Pullman, Washington 99164-6340, USA. cyq12@faculty.pccu.edu.tw
William F Siems
Gregory Pearce
Clarence A Ryan

Funding

MALDI TOF/TOF MASS SPECTROMETER SYSTEM FOR PROTEOMICSS10RR022538 · NCRR · WASHINGTON STATE UNIVERSITY · PI BRUCE, JAMES EDWARD · 2006 to 2006
$378k
NCRR NIH HHS 1S10RR022538
6 · The paper itself

Abstract

A mixture of three homologous bioactive hydroxyproline-rich glycopeptides (HypSys peptides) of 18 amino acids in length, differing only at two residues, was isolated from leaves of Ipomoea batatas, the common sweet potato. One of the peptides represented over 95% of the isolated isopeptides, which, at 2.5 nm concentration, induced the expression of sporamin, a major defense protein of I. batatas. The sequence of the major isoform was used to synthesize a primer that identified a cDNA encoding a precursor protein. The protein contained six proline-rich regions whose sequences suggested that they might be HypSys defense signals. One of the encoded peptides, called IbHypSys IV, was identical to one of two minor components of the isolated isopeptides, but neither the major isopeptide nor the other minor isoform was found within the precursor. The six peptides encoded by the precursor gene were synthesized but with hydroxyproline residues at positions found in the native isoforms and lacking carbohydrate moieties. All of the peptides were biologically active when supplied to leaves of sweet potato plants. The gene is the first ortholog of the preproHypSys gene family to be found outside of the Solanaceae family, and its encoded peptide precursor is the first example in plants of a precursor protein with six potential peptide defense signals, a scenario only found previously in animals. The data indicate that multiple copies of the HypSys peptides in a single precursor may have an important role in amplifying wound signaling in leaves in response to herbivore attacks.

Indexed as

Gene Expression RegulationGene Expression Regulation, PlantAmino Acid SequenceBase SequenceChromatography, High Pressure LiquidDNA, ComplementaryDose-Response Relationship, DrugIpomoea batatasModels, BiologicalMolecular Sequence DataPeptidesPlant LeavesPlant ProteinsProtein PrecursorsSequence Homology, Amino AcidWound HealingDNA, ComplementaryPeptidesPlant ProteinsProtein Precursorssporamin A precursor, Ipomoea batatas

Identifiers

PMID18299332
PMCPMC2431084

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.