Evidence map›Paper›PMID 18297458›Full record

ReviewGeneral thoracic and cardiovascular surgery2008

From cancer genomics to thoracic oncology: discovery of new biomarkers and therapeutic targets for lung and esophageal carcinoma.

Yataro Daigo, Yusuke Nakamura

9 registry-linked trialsAbstract readReview
PubMed Publisher
In one paragraph

Review in General thoracic and cardiovascular surgery, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to 9 registered trials, which are not on this map. Cited by 21 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT00673777 phase1 / phase2unknown statusnot on this map

Phase I/II Study of Multiple-Vaccine Therapy Using Epitope Peptide Restricted to HLA-A*0201 in Treating Patients With Refractory Non-Small Cell Lung Cancer

TypeinterventionalSponsorTokyo UniversityRan2008 to 2009Enrolled14ConditionsNon Small Cell Lung CancerArmsURLC10, VEGFR1 and VEGFR2
NCT00674258 phase1 / phase2unknown statusnot on this map

Phase I/II Study of Multiple-Vaccine Therapy Using Epitope Peptide Restricted to HLA-A*0201 in Treating Patients With Refractory Non-Small Cell Lung Cancer

TypeinterventionalSponsorTokyo UniversityRan2008 to 2009Enrolled14ConditionsNon Small Cell Lung CancerArmsURLC10, TTK and KOC1
NCT01069575 phase1completednot on this mapstarted 2010, after this paper: background citation

Phase I Study of Cancer Vaccine Therapy Using Epitope Peptide Restricted to HLA-A*24 (URLC10,CDCA1,KIF20A) in Patients With Non-small Cell Lung Cancer Refractory to Standard Therapy

TypeinterventionalSponsorShiga UniversityRan2010 to 2019Enrolled18ConditionsNon-Small Cell Lung CancerArmsHLA-A*2402restricted URLC10, CDCA1, and KIF20A peptides
NCT01069640 phase1completednot on this mapstarted 2010, after this paper: background citation

Phase I Study of Cancer Vaccine Therapy Using Epitope Peptide Restricted to HLA-A*02 (URLC10) in Patients With Non-small Cell Lung Cancer Refractory to Standard Therapy

TypeinterventionalSponsorShiga UniversityRan2010 to 2019Enrolled9ConditionsNon-small Cell Lung CancerArmsHLA-A*0201 or HLA-A*0206-restricted URLC10 peptides
NCT01069653 phase1completednot on this mapstarted 2010, after this paper: background citation

Phase I Study of Cancer Vaccine Therapy Using Epitope Peptide Restricted to HLA-A*24 (CDCA1,KIF20A) in Patients With Small Cell Lung Cancer Refractory to Standard Therapy

TypeinterventionalSponsorShiga UniversityRan2010 to 2019Enrolled9ConditionsSmall Cell Lung CancerArmsHLA-A*2402-restricted CDCA1 and KIF20A peptides
NCT01592617 phase2unknown statusnot on this mapstarted 2012, after this paper: background citation

Phase II Study of Peptide Cancer Vaccine S-488410 to Treat Advanced Non-Small Cell Lung Cancer

TypeinterventionalSponsorShiga UniversityRan2012 to 2015Enrolled45ConditionsCarcinoma, Non-Small-Cell LungArmsS-488410
NCT01949701 phase1 / phase2completednot on this mapstarted 2011, after this paper: background citation

Phase I/II Study Using Epitope Peptide Restricted to HLA-A*24 (URLC10) in Patients With Disease Controlled Advanced Non-small Cell Lung Cancer

TypeinterventionalSponsorShiga UniversityRan2011 to 2019Enrolled6ConditionsNon-small Cell Lung CancerArmsHLA-A*0201restricted URLC10 peptides with adjuvant
NCT01950156 phase1 / phase2completednot on this mapstarted 2011, after this paper: background citation

Phase I/II Study Using Epitope Peptide Restricted to HLA-A*24 (URLC10,CDCA1,KIF20A) in Patients With Disease Controlled Advanced Non-small Cell Lung Cancer

TypeinterventionalSponsorShiga UniversityRan2011 to 2019Enrolled6ConditionsNon-small Cell Lung CancerArmsHLA-A*2402restricted URLC10, CDCA1, and KIF20A peptides with adjuvant
NCT02410369 phase2unknown statusnot on this mapstarted 2015, after this paper: background citation

Phase II Study of S-588410 as Maintenance Monotherapy After Adjuvant Chemotherapy in Patients With Completely Resected Non-small- Cell Lung Cancer

TypeinterventionalSponsorTokyo UniversityRan2015 to 2021Enrolled60ConditionsNon-small- Cell Lung CancerArmsS-588410, Placebo
3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
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  6. Article
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  11. Clinical and molecular features of rapidly progressive chronic hypersensitivity pneumonitis.Sarcoidosis, vasculitis, and diffuse lung diseases : official journal of WASOG · 2017
    Article
  12. Article
  13. Association between TERT rs2736100 polymorphism and lung cancer susceptibility: evidence from 22 case-control studies.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2014
    Article
  14. Article
  15. Phase I clinical trial of vaccination with LY6K-derived peptide in patients with advanced gastric cancer.Gastric cancer : official journal of the International Gastric Cancer Association and the Japanese Gastric Cancer Association · 2014
    Article
  16. Article
  17. Article
  18. Variation in TP63 is associated with lung adenocarcinoma in the UK population.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2011
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Yataro DaigoLaboratory of Molecular Medicine, Human Genome Center, Institute of Medical Science, The University of Tokyo, 4-6-1 Shirokanedai, Minato-ku, Tokyo 108-8639, Japan.
Yusuke Nakamura

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Over the last decade, many genetic and epigenetic alterations involved in the development and progression of lung and esophageal cancers have been reported, but their precise molecular mechanisms have remained unclear. Although novel drugs targeting some of these molecular targets have been developed, they provide limited survival benefits to only a small subset of cancer patients, and only a small number of practically useful biomarkers are presently available. To identify the molecules involved in lung and esophageal carcinogenesis and those applicable as novel tumor biomarkers and for the development of new molecular therapies, we performed gene expression profile analysis of 101 archived lung cancers and 19 esophageal squamous cell carcinomas whose tumor cells were purified by laser microdissection. Through a subsequent systematic approach using tissue microarray, RNA interference, and high throughput enzyme-linked immunosorbent assay techniques as well as bioinformatics, we have identified a set of molecules that fall into the category of oncoantigens. These molecules are potentially promising candidates for the development of novel diagnostic biomarkers, therapeutic drugs, and/or immunotherapy; there is also a small subset of biomarkers for predicting the presence of lymph node metastasis in surgically treated patients. In this article, we introduce our sophisticated and integrated cancer genomics strategy for improving the treatment of cancer patients.

Indexed as

Gene Expression Regulation, NeoplasticGenomicsMedical OncologyAntineoplastic AgentsBiomarkers, TumorCancer VaccinesCarcinoma, Squamous CellComputational BiologyEnzyme-Linked Immunosorbent AssayEsophageal NeoplasmsGene Expression ProfilingHumansLung NeoplasmsLymphatic MetastasisNeoplasm StagingOligonucleotide Array Sequence AnalysisAntineoplastic AgentsBiomarkers, TumorCancer VaccinesPeptides

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

and 3 more above

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.