Evidence map›Paper›PMID 18297134›Full record

ArticlePloS one2008

Gene expression profiling of a mouse model of pancreatic islet dysmorphogenesis.

Laura Wilding Crawford, Elizabeth Tweedie Ables, Young Ah Oh, Braden Boone, Shawn Levy, Maureen Gannon

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 1 pooled it
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 1 synthesis or guideline pooled it, 21 citations in OpenAlex.

  1. Loss of HNF6 expression correlates with human pancreatic cancer progression.Laboratory investigation; a journal of technical methods and pathology · 2014
    Pooled it
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Onecut transcription factors in development and disease.Trends in developmental biology · 2016
    Article
  8. Article
  9. Review
  10. Inactivation of the dual Bmp/Wnt inhibitor Sostdc1 enhances pancreatic islet function.American journal of physiology. Endocrinology and metabolism · 2012
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Pancreas cell fate.Birth defects research. Part C, Embryo today : reviews · 2009
    Review
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Laura Wilding CrawfordDepartment of Molecular Physiology and Biophysics, Vanderbilt University Medical Center, Nashville, Tennessee, USA.
Elizabeth Tweedie Ables
Young Ah Oh
Braden Boone
Shawn Levy
Maureen Gannon
Vanderbilt University Medical Center · US

Funding

MULTIDISCIPLINARY TRAINING IN MOLECULAR ENDOCRINOLOGYT32DK007563 · NIDDK · VANDERBILT UNIVERSITY · PI Richard M O'Brien · 1988 to 2026
$15.9M
Training Program in Stem Cell and Regenerative Developmental BiologyT32HD007502 · NICHD · VANDERBILT UNIVERSITY · PI WRIGHT, CHRISTOPHER V · 1997 to 2022
$5.4M
HNF6 Function in the Pancreatic Endocrine LineageR01DK065131 · NIDDK · VANDERBILT UNIVERSITY · PI GANNON, MAUREEN A · 2003 to 2010
$1.7M
NICHD NIH HHS 5-T32-HD05702NICHD NIH HHS T32 HD007502NIDDK NIH HHS 5-T32-DK07563NIDDK NIH HHS DK065131NIDDK NIH HHS R01 DK065131NIDDK NIH HHS T32 DK007563
6 · The paper itself

Abstract

backgroundIn the past decade, several transcription factors critical for pancreas organogenesis have been identified. Despite this success, many of the factors necessary for proper islet morphogenesis and function remain uncharacterized. Previous studies have shown that transgenic over-expression of the transcription factor Hnf6 specifically in the pancreatic endocrine cell lineage resulted in disruptions in islet morphogenesis, including dysfunctional endocrine cell sorting, increased individual islet size, increased number of peripheral endocrine cell types, and failure of islets to migrate away from the ductal epithelium. The mechanisms whereby maintained Hnf6 causes defects in islet morphogenesis have yet to be elucidated. METHODOLOGY/PRINCIPAL

findingsWe exploited the dysmorphic islets in Hnf6 transgenic animals as a tool to identify factors important for islet morphogenesis. Genome-wide microarray analysis was used to identify differences in the gene expression profiles of late gestation and early postnatal total pancreas tissue from wild type and Hnf6 transgenic animals. Here we report the identification of genes with an altered expression in Hnf6 transgenic animals and highlight factors with potential importance in islet morphogenesis. Importantly, gene products involved in cell adhesion, cell migration, ECM remodeling and proliferation were found to be altered in Hnf6 transgenic pancreata, revealing specific candidates that can now be analyzed directly for their role in these processes during islet development. CONCLUSIONS/SIGNIFICANCE: This study provides a unique dataset that can act as a starting point for other investigators to explore the role of the identified genes in pancreatogenesis, islet morphogenesis and mature beta cell function.

Indexed as

Gene Expression ProfilingAnimalsDisease Models, AnimalGene Expression Regulation, DevelopmentalGenomicsHepatocyte Nuclear Factor 6Islets of LangerhansMiceMice, TransgenicMorphogenesisPancreatic DiseasesHepatocyte Nuclear Factor 6Onecut1 protein, mouse

Identifiers

PMID18297134
PMCPMC2249940
OpenAlexW2019150306

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.