Evidence map›Paper›PMID 18296696›Full record

ArticleMolecular biology and evolution2008

Evolution of gene expression in the Drosophila olfactory system.

Artyom Kopp, Olga Barmina, Andrew M Hamilton, Laura Higgins, Lauren M McIntyre, Corbin D Jones

Open access · bronzeAbstract read
In one paragraph

Article in Molecular biology and evolution, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 82 citations in OpenAlex.

  1. Article
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  6. Sex-biased expression is associated with chromatin state inbioRxiv : the preprint server for biology · 2023
    Article
  7. Phenotypic Changes ofHelminthologia · 2022
    Article
  8. Article
  9. Changes in Presynaptic Gene Expression during Homeostatic Compensation at a Central Synapse.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2021
    Article
  10. Evolution of olfactory circuits in insects.Journal of comparative physiology. A, Neuroethology, sensory, neural, and behavioral physiology · 2020
    Review
  11. Article
  12. Review
  13. Review
  14. Article
  15. Article
  16. Review
  17. The Two Main Olfactory Receptor Families inFrontiers in cellular neuroscience · 2018
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

Artyom KoppSection of Evolution and Ecology, University of California, Davis, USA. akopp@ucdavis.edu
Olga Barmina
Andrew M Hamilton
Laura Higgins
Lauren M McIntyre
Corbin D Jones
University of California, Davis · USAmes Research Center · USUniversity of Florida · USUniversity of North Carolina at Chapel Hill · US

Funding

VITAMINS, AMINO ACIDS, AND RELATED PRODUCTS CORE LABORATORYP30DK035747 · NIDDK · UNIVERSITY OF CALIFORNIA DAVIS · PI HALSTED, CHARLES HOPKINSON · 1986 to 2005
$4.7M
Genetic variation of allele-specific transcriptome in DrosophilaR01GM077618 · NIGMS · UNIVERSITY OF FLORIDA · PI MCINTYRE, LAUREN M. · 2007 to 2010
$1.5M
Quantitative genomics of sexual dimorphismR24GM065513 · NIGMS · UNIVERSITY OF CALIFORNIA DAVIS · PI NUZHDIN, SERGEY V · 2002 to 2005
$1.5M
NIDDK NIH HHS DK35747NIDDK NIH HHS P30 DK035747NIGMS NIH HHS 1R01GM077618-01A1NIGMS NIH HHS 1R24GM065513-01NIGMS NIH HHS R01 GM077618NIGMS NIH HHS R24 GM065513
6 · The paper itself

Abstract

Host plant shifts by phytophagous insects play a key role in insect evolution and plant ecology. Such shifts often involve major behavioral changes as the insects must acquire an attraction and/or lose the repulsion to the new host plant's odor and taste. The evolution of chemotactic behavior may be due, in part, to gene expression changes in the peripheral sensory system. To test this hypothesis, we compared gene expression in the olfactory organs of Drosophila sechellia, a narrow ecological specialist that feeds on the fruit of Morinda citrifolia, with its close relatives Drosophila simulans and Drosophila melanogaster, which feed on a wide variety of decaying plant matter. Using whole-genome microarrays and quantitative polymerase chain reaction, we surveyed the entire repertoire of Drosophila odorant receptors (ORs) and odorant-binding proteins (OBPs) expressed in the antennae. We found that the evolution of OR and OBP expression was accelerated in D. sechellia compared both with the genome average in that species and with the rate of OR and OBP evolution in the other species. However, some of the gene expression changes that correlate with D. sechellia's increased sensitivity to Morinda odorants may predate its divergence from D. simulans. Interspecific divergence of olfactory gene expression cannot be fully explained by changes in the relative abundance of different sensilla as some ORs and OBPs have evolved independently of other genes expressed in the same sensilla. A number of OR and OBP genes are upregulated in D. sechellia compared with its generalist relatives. These genes include Or22a, which likely responds to a key odorant of M. citrifolia, and several genes that are yet to be characterized in detail. Increased expression of these genes in D. sechellia may have contributed to the evolution of its unique chemotactic behavior.

Indexed as

Evolution, MolecularGene ExpressionAnimalsDrosophilaDrosophila ProteinsGenes, InsectGenetic VariationMultigene FamilyOlfactory PathwaysOligonucleotide Array Sequence AnalysisSmellDrosophila Proteins

Identifiers

PMID18296696
PMCPMC3299402
OpenAlexW2121336871

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.