Evidence map›Paper›PMID 18293107›Full record

ArticleChromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology2008

Multidirectional cross-species painting illuminates the history of karyotypic evolution in Perissodactyla.

Vladimir A Trifonov, Roscoe Stanyon, Anastasia I Nesterenko, Beiyuan Fu, Polina L Perelman, Patricia C M O'Brien, Gary Stone, Nadezhda V Rubtsova, Marlys L Houck, Terence J Robinson and 4 more

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
13.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 80 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. CENP-A and centromere evolution in equids.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2025
    Review
  6. Genomic map of the functionally extinct northern white rhinoceros (Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  7. Article
  8. Tibetan wild ass,Journal of equine science · 2025
    Review
  9. Article
  10. Article
  11. Review
  12. A Satellite-Free Centromere inInternational journal of molecular sciences · 2023
    Article
  13. Article
  14. Article
  15. Molecular Dynamics and Evolution of Centromeres in the Genus Equus.International journal of molecular sciences · 2022
    Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

14 authors at 9 institutions in 6 countries.

Vladimir A TrifonovInstitute of Cytology and Genetics, Russian Academy of Sciences, Novosibirsk, 630090, Russia. vlad@bionet.nsc.ru
Roscoe Stanyon
Anastasia I Nesterenko
Beiyuan Fu
Polina L Perelman
Patricia C M O'Brien
Gary Stone
Nadezhda V Rubtsova
Marlys L Houck
Terence J Robinson
Malcolm A Ferguson-Smith
Gauthier Dobigny
Alexander S Graphodatsky
Fengtang Yang
Institute of Cytology and Genetics · RUGenomics (United Kingdom) · GBNational Cancer Institute · USInstitut de Recherche pour le Développement · FRMRC Human Nutrition Research · GBStellenbosch University · ZAUniversity of Florence · ITWellcome Sanger Institute · GBZoological Society of San Diego · US

Funding

Wellcome Trust
6 · The paper itself

Abstract

The order Perissodactyla, the group of odd-toed ungulates, includes three extant families: Equidae, Tapiridae, and Rhinocerotidae. The extremely rapid karyotypic diversification in perissodactyls has so far prevented the establishment of genome-wide homology maps between these three families by traditional cytogenetic approaches. Here we report the first genome-wide comparative chromosome maps of African rhinoceroses, four tapir species, four equine species, and humans. These maps were established by multidirectional chromosome painting, with paint probes derived from flow-sorted chromosomes of Equus grevyi, Tapirus indicus, and Ceratotherium simum as well as painting probes from horse and human. The Malayan tapir (Tapirus indicus), Baird's tapir (T. bairdii), mountain tapir (T. pinchaque), lowland tapir (T. terrestris), and onager (E. hemionus onager), were studied by cross-species chromosome painting for the first time. Our results, when integrated with previously published comparative chromosome maps of the other perissodactyl species, have enabled the reconstruction of perissodactyl, ceratomorph, and equid ancestral karyotypes, and the identification of the defining evolutionary chromosomal rearrangements along each lineage. Our results allow a more reliable estimate of the mode and tempo of evolutionary chromosomal rearrangements, revealing a striking switch between the slowly evolving ceratomorphs and extremely rapidly evolving equids.

Indexed as

Chromosome PaintingEvolution, MolecularAnimalsChromosomes, MammalianEquidaeHumansKaryotypingMolecular ProbesPerissodactylaPhylogenySpecies SpecificityMolecular Probes

Identifiers

PMID18293107
OpenAlexW2012047167

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.