Evidence map›Paper›PMID 18287399›Full record

ReviewAmerican journal of physiology. Renal physiology2008

Transcriptional control of terminal nephron differentiation.

Samir S El-Dahr, Karam Aboudehen, Zubaida Saifudeen

Open access · greenAbstract readReview
In one paragraph

Review in American journal of physiology. Renal physiology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 28 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Adaptive response of the murine collecting duct to alkali loading.Pflugers Archiv : European journal of physiology · 2020
    Article
  7. Regulation of kidney development by the Mdm2/Mdm4-p53 axis.Journal of molecular cell biology · 2017
    Review
  8. Article
  9. Article
  10. Mechanisms of p53 activation and physiological relevance in the developing kidney.American journal of physiology. Renal physiology · 2012
    Article
  11. Zebrafish nephrogenesis involves dynamic spatiotemporal expression changes in renal progenitors and essential signals from retinoic acid and irx3b.Developmental dynamics : an official publication of the American Association of Anatomists · 2011
    Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Samir S El-DahrSection of Pediatric Nephrology, Department of Pediatrics, SL-37, Tulane Univ. Health Sciences Center, 1430 Tulane Ave., New Orleans, LA 70112, USA. seldahr@tulane.edu
Karam Aboudehen
Zubaida Saifudeen
Tulane University · US

Funding

TULANE COBRE: TRANSGENIC &GENE-TARGETED ANIMAL COREP20RR017659 · NCRR · TULANE UNIVERSITY OF LOUISIANA · PI PRIETO, MINOLFA C · 2002 to 2011
$22.1M
Inducible Dysplastic Nephropathy in B2-Deficient MiceR01DK056264 · NIDDK · TULANE UNIVERSITY OF LOUISIANA · PI EL-DAHR, SAMIR S · 2000 to 2014
$3.8M
TERMINAL DIFFERENTIATION OF THE RENAL EPITHELIUMR01DK062250 · NIDDK · TULANE UNIVERSITY OF LOUISIANA · PI EL-DAHR, SAMIR S · 2003 to 2012
$2.5M
Detecting Impending Dialysis Access Graft FailureR43DK062550 · NIDDK · DVX, LLC · PI VILKOMERSON, DAVID · 2002 to 2002
$100k
NCRR NIH HHS 1P20 RR-017659NCRR NIH HHS P20 RR017659NIDDK NIH HHS DK-56264NIDDK NIH HHS DK-62550NIDDK NIH HHS R01 DK056264NIDDK NIH HHS R01 DK062250
6 · The paper itself

Abstract

Terminal differentiation of epithelial cells into more specialized cell types is a critical step in organogenesis. Throughout the process of terminal differentiation, epithelial progenitors acquire or upregulate expression of renal function genes and cease to proliferate, while expression of embryonic genes is repressed. This exquisite coordination of gene expression is accomplished by signaling networks and transcription factors which couple the external environment with the new functional demands of the cell. While there has been much progress in understanding the early steps involved in renal epithelial cell differentiation, a major gap remains in our knowledge of the factors that control the steps of terminal differentiation. A number of signaling molecules and transcription factors have been recently implicated in determining segmental nephron identity and functional differentiation. While some of these factors (the p53 gene family, hepatocyte nuclear factor-1beta) promote the terminal epithelial differentiation fate, others (Notch, Brn-1, IRX, KLF4, and Foxi1) tend to regulate differentiation of specific nephron segments and individual cell types. This review summarizes current knowledge related to these transcription factors and discusses how diverse cellular signals are integrated to generate a transcriptional output during the process of terminal differentiation. Since these transcriptional processes are accompanied by profound changes in nuclear chromatin structure involving the genes responsible for creating and maintaining the differentiated cell phenotype, future studies should focus on identifying the nature of these epigenetic events and factors, how they are regulated temporally and spatially, and the chromatin environment they eventually reside in.

Indexed as

AnimalsCell DifferentiationGene Expression Regulation, DevelopmentalHumansKruppel-Like Factor 4NephronsTranscription, GeneticKruppel-Like Factor 4

Identifiers

PMID18287399
PMCPMC2606293
OpenAlexW2142364976

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.