Evidence map›Paper›PMID 18287091›Full record

ArticleThe Journal of biological chemistry2008

Ikaros directly represses the notch target gene Hes1 in a leukemia T cell line: implications for CD4 regulation.

Katie L Kathrein, Sheila Chari, Susan Winandy

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
8.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 57 citations in OpenAlex.

  1. Article
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  4. TGFCells · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Katie L KathreinDepartment of Microbiology-Immunology, Northwestern University Feinberg School of Medicine, Chicago, Illinois 60611, USA.
Sheila Chari
Susan Winandy
Northwestern University · US

Funding

CELLULAR &MOLECULAR BASIS OF DISEASE TRAINING PROGRAMT32GM008061 · NIGMS · NORTHWESTERN UNIVERSITY · PI CARTHEW, RICHARD W. · 1985 to 2022
$17.1M
The molecular role of lkaros in leukemogenesisR01CA104962 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI WINANDY, SUSAN M · 2006 to 2009
$848k
NCI NIH HHS R01 CA104962-01A1NIGMS NIH HHS T32 GM08061
6 · The paper itself

Abstract

Ikaros and Notch1, two regulators of gene transcription, are critically important at many stages of T cell development. Deregulation of Ikaros and Notch activities cooperate to promote T cell leukemogenesis, providing evidence that they function in converging pathways in developing T cells. In this report, a mechanism for Ikaros:Notch cooperativity is described, revealing a non-redundant role for Ikaros in regulating expression of the Notch target gene Hes1 in a leukemia T cell line. We provide evidence that Ikaros directly represses Hes1 in concert with the transcriptional repressor, RBP-Jkappa, allowing for cross-talk between Notch and Ikaros that impacts regulation of CD4 expression. Taken together, these data describe a potential mechanism for Ikaros' function during T cell development and define Ikaros as an obligate repressor of Hes1.

Indexed as

Gene Expression RegulationAmino Acid SequenceAnimalsBasic Helix-Loop-Helix ProteinsCD4 AntigensCell Line, TumorGene SilencingHomeodomain ProteinsHumansIkaros Transcription FactorImmunoglobulin J Recombination Signal Sequence-Binding ProteinMiceModels, BiologicalMolecular Sequence DataPromoter Regions, GeneticReceptor, Notch1Basic Helix-Loop-Helix ProteinsCD4 AntigensHes1 protein, mouseHomeodomain ProteinsIkaros Transcription FactorImmunoglobulin J Recombination Signal Sequence-Binding ProteinNotch1 protein, mouseReceptor, Notch1Transcription Factor HES-1Zfpn1a1 protein, mouse

Identifiers

PMID18287091
PMCPMC2447659
OpenAlexW1987857416

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.