Evidence map›Paper›PMID 18287041›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2008

Arabidopsis LEAFY COTYLEDON2 induces maturation traits and auxin activity: Implications for somatic embryogenesis.

Sandra L Stone, Siobhan A Braybrook, Stephanie L Paula, Linda W Kwong, Jonathan Meuser, Julie Pelletier, Tzung-Fu Hsieh, Robert L Fischer, Robert B Goldberg, John J Harada

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 156 papers.

0numbers the graph read from it
0cells of the map it votes in
156citing papers in PubMed
17.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

156 citing papers in PubMed, 299 citations in OpenAlex.

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  6. Cell-specific dedifferentiation inbioRxiv : the preprint server for biology · 2026
    Article
  7. Review
  8. Cell cycle in plant development and reprogramming.Development (Cambridge, England) · 2026
    Review
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96 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Sandra L StoneSection of Plant Biology, College of Biological Sciences, and Graduate Program in Plant Biology, University of California, Davis, CA 95616, USA.
Siobhan A Braybrook
Stephanie L Paula
Linda W Kwong
Jonathan Meuser
Julie Pelletier
Tzung-Fu Hsieh
Robert L Fischer
Robert B Goldberg
John J Harada
University of California, Berkeley · USUniversity of California, Davis · USUniversity of California, Los Angeles · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

LEAFY COTYLEDON2 (LEC2) is a central regulator of embryogenesis sufficient to induce somatic cells to form embryos when expressed ectopically. Here, we analyze the cellular processes induced by LEC2, a B3 domain transcription factor, that may underlie its ability to promote somatic embryogenesis. We show auxin-responsive genes are induced after LEC2 activation in seedlings. Genes encoding enzymes involved in auxin biosynthesis, YUC2 and YUC4, are activated within 1 h after induction of LEC2 activity, and YUC4 appears to be a direct transcriptional target of LEC2. We also show ectopic LEC2 expression induces accumulation of seed storage protein and oil bodies in vegetative and reproductive organs, events that normally occur during the maturation phase of embryogenesis. Furthermore, LEC2 activates seed protein genes before an increase in RNAs encoding LEC1 or FUS3 is observed. Thus, LEC2 causes rapid changes in auxin responses and induces cellular differentiation characteristic of the maturation phase. The relevance of these changes to the ability of LEC2 to promote somatic embryogenesis is discussed.

Indexed as

ArabidopsisArabidopsis ProteinsCell DifferentiationChromatin ImmunoprecipitationDNA PrimersEmbryonic DevelopmentGene Expression Regulation, DevelopmentalIndoleacetic AcidsReverse Transcriptase Polymerase Chain ReactionSeedsTranscription FactorsArabidopsis ProteinsDNA PrimersIndoleacetic AcidsLEC2 protein, ArabidopsisTranscription Factors

Identifiers

PMID18287041
PMCPMC2268600
OpenAlexW2111832298

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.