Evidence map›Paper›PMID 18285466›Full record

ArticleMolecular and cellular biology2008

Spreading of a corepressor linked to action of long-range repressor hairy.

Carlos A Martinez, David N Arnosti

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
4.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 32 citations in OpenAlex.

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  20. Groucho corepressor functions as a cofactor for the Knirps short-range transcriptional repressor.Proceedings of the National Academy of Sciences of the United States of America · 2009
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Carlos A MartinezDepartment of Biochemistry and Molecular Biology and Genetics Program, Michigan State University, East Lansing, MI 48824-1319, USA.
David N Arnosti
Michigan State University · US

Funding

MOLECULAR ANALYSIS OF TRANSCRIPTIONAL REPRESSIONR01GM056976 · NIGMS · MICHIGAN STATE UNIVERSITY · PI ARNOSTI, DAVID N · 1998 to 2014
$4.7M
NIGMS NIH HHS GM56976NIGMS NIH HHS R01 GM056976
6 · The paper itself

Abstract

Transcriptional repressor proteins play key roles in the control of gene expression in development. For the Drosophila embryo, the following two functional classes of repressors have been described: short-range repressors such as Knirps that locally inhibit the activity of enhancers and long-range repressors such as Hairy that can dominantly inhibit distal elements. Several long-range repressors interact with Groucho, a conserved corepressor that is homologous to mammalian TLE proteins. Groucho interacts with histone deacetylases and histone proteins, suggesting that it may effect repression by means of chromatin modification; however, it is not known how long-range effects are mediated. Using embryo chromatin immunoprecipitation, we have analyzed a Hairy-repressible gene in the embryo during activation and repression. When inactivated, repressors, activators, and coactivators cooccupy the promoter, suggesting that repression is not accomplished by the displacement of activators or coactivators. Strikingly, the Groucho corepressor is found to be recruited to the transcribed region of the gene, contacting a region of several kilobases, concomitant with a loss of histone H3 and H4 acetylation. Groucho has been shown to form higher-order complexes in vitro; thus, our observations suggest that long-range effects may be mediated by a "spreading" mechanism, modifying chromatin over extensive regions to inhibit transcription.

Indexed as

Gene Expression Regulation, EnzymologicAnimalsBasic Helix-Loop-Helix ProteinsChromatinDrosophila melanogasterDrosophila ProteinsEmbryo, NonmammalianPromoter Regions, GeneticRepressor ProteinsTranscription, GeneticTransgenesBasic Helix-Loop-Helix ProteinsChromatinDrosophila Proteinsgro protein, Drosophilahairy protein, DrosophilaRepressor Proteins

Identifiers

PMID18285466
PMCPMC2293098
OpenAlexW2136819592

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.