Evidence map›Paper›PMID 18283552›Full record

ArticleMolecular diversity

Prediction of mutations in H1 neuraminidases from North America influenza A virus engineered by internal randomness.

Guang Wu, Shaomin Yan

Abstract read
PubMed Publisher
In one paragraph

Article in Molecular diversity. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Connecting mutant phenylalanine hydroxylase with phenylketonuria.Journal of clinical monitoring and computing · 2008
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Guang WuComputational Mutation Project, DreamSciTech Consulting, Nanyou A-zone, Jiannan Road, Shenzhen, Guangdong Province, China. hongguanglishibahao@yahoo.com
Shaomin Yan
BH Consulting (Ireland) · IE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Recently, we defined the randomness within a protein as an important force engineering mutations. Thereafter we build a cause-mutation relationship, where one side is the quantified randomness and the other side is the occurrence or non-occurrence of mutation. This way, we switch the prediction of mutation into the problem of classification, which can be solved using either logistic regression or neural network. Very recently, we attempted to apply the logistic regression to predicting the mutation positions in proteins from influenza A virus. In this study, we attempt to explore the possibility of applying the neural network to predicting the mutation positions in H1 neuraminidase from influenza A virus. Then we applied the amino-acid mutating probability to predicting the would-be-mutated amino acids at predicted positions. The results confirm the possibility of prediction of mutation using this approach and pave the way for future development.

Indexed as

Models, GeneticMutationAmino Acid SubstitutionCodonInfluenza A virusNeural Networks, ComputerNeuraminidaseNorth AmericaProbabilityProtein EngineeringSensitivity and SpecificityStochastic ProcessesCodonNeuraminidase

Identifiers

PMID18283552
OpenAlexW1999520013

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.