Evidence map›Paper›PMID 18282296›Full record

ArticleGenome biology2008

Proteomic analysis of the secretome of Leishmania donovani.

J Maxwell Silverman, Simon K Chan, Dale P Robinson, Dennis M Dwyer, Devki Nandan, Leonard J Foster, Neil E Reiner

Open access · goldAbstract read
In one paragraph

Article in Genome biology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 161 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
161citing papers in PubMed, 1 pooled it
15.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

161 citing papers in PubMed, 1 synthesis or guideline pooled it, 299 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Frontiers in immunology · 2026
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  10. Characterization of the First Secreted Sorting Nexin Identified in theInternational journal of molecular sciences · 2024
    Article
  11. Article
  12. Article
  13. Immunomodulatory properties ofFrontiers in parasitology · 2024
    Article
  14. Article
  15. LeishMANIAdb: a comparative resource for Leishmania proteins.Database : the journal of biological databases and curation · 2023
    Article
  16. Review
  17. International journal of molecular sciences · 2023
    Article
  18. Parasitology · 2023
    Article
  19. Non-Vesicular Lipid Transport Machinery inInternational journal of molecular sciences · 2023
    Review
  20. Article

101 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

J Maxwell SilvermanDepartment of Medicine (Division of Infectious Diseases), University of British Columbia, Faculty of Medicine, 2733 Heather St, Vancouver, British Columbia, V5Z 3J5, Canada. maxer@interchnage.ubc.ca
Simon K Chan
Dale P Robinson
Dennis M Dwyer
Devki Nandan
Leonard J Foster
Neil E Reiner
Vancouver Coastal Health Research Institute · CANational Institutes of Health · USUniversity of British Columbia · CA

Funding

Biochemical And Molecular Characterization Of Enzymes Secreted By LeishmaniaZIAAI000745 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI DWYER, DENNIS · 2009 to 2012
$1.2M
Cell And Developmental Biology: Trypanosomatid ParasitesZ01AI000162 · NIAID · NIAID EXTRAMURAL ACTIVITIES · PI DWYER, DENNIS · 1985 to 2008
$415k
BIOCHEMICAL AND MOLECULAR CHARACTERIZATION OF ENZYMES SECRETED BY LEISHMANIAZ01AI000745 · NIAID · NIAID EXTRAMURAL ACTIVITIES · PI DWYER, DENNIS · 1996 to 2008
$335k
6 · The paper itself

Abstract

backgroundLeishmania and other intracellular pathogens have evolved strategies that support invasion and persistence within host target cells. In some cases the underlying mechanisms involve the export of virulence factors into the host cell cytosol. Previous work from our laboratory identified one such candidate leishmania effector, namely elongation factor-1alpha, to be present in conditioned medium of infectious leishmania as well as within macrophage cytosol after infection. To investigate secretion of potential effectors more broadly, we used quantitative mass spectrometry to analyze the protein content of conditioned medium collected from cultures of stationary-phase promastigotes of Leishmania donovani, an agent of visceral leishmaniasis.

resultsAnalysis of leishmania conditioned medium resulted in the identification of 151 proteins apparently secreted by L. donovani. Ratios reflecting the relative amounts of each leishmania protein secreted, as compared to that remaining cell associated, revealed a hierarchy of protein secretion, with some proteins secreted to a greater extent than others. Comparison with an in silico approach defining proteins potentially exported along the classic eukaryotic secretion pathway suggested that few leishmania proteins are targeted for export using a classic eukaryotic amino-terminal secretion signal peptide. Unexpectedly, a large majority of known eukaryotic exosomal proteins was detected in leishmania conditioned medium, suggesting a vesicle-based secretion system.

conclusionThis analysis shows that protein secretion by L. donovani is a heterogeneous process that is unlikely to be determined by a classical amino-terminal secretion signal. As an alternative, L. donovani appears to use multiple nonclassical secretion pathways, including the release of exosome-like microvesicles.

Indexed as

ProteomicsAnimalsApoptosisComputational BiologyCulture Media, ConditionedGenes, ProtozoanLeishmania donovaniMass SpectrometryMicrobodiesProtozoan ProteinsSecretory VesiclesCulture Media, ConditionedProtozoan Proteins

Identifiers

PMID18282296
PMCPMC2374696
OpenAlexW2108681289

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.