Evidence map›Paper›PMID 18281312›Full record

ArticleNucleic acids research2008

Evidence for Ku70/Ku80 association with full-length RAG1.

Prafulla Raval, Aleksei N Kriatchko, Sushil Kumar, Patrick C Swanson

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 53 citations in OpenAlex.

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  8. DNA Damage Response and Repair in Adaptive Immunity.Frontiers in cell and developmental biology · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Prafulla RavalDepartment of Medical Microbiology and Immunology, Creighton University Medical Center, Omaha, NE 68178, USA.
Aleksei N Kriatchko
Sushil Kumar
Patrick C Swanson
CHI Health Creighton University Medical Center - Bergan Mercy · USCreighton University · US

Funding

CONSTRUCTION OF RESEARCH FACILITYC06RR017417 · NCRR · CREIGHTON UNIVERSITY · PI WILSON, M. ROY · 2002 to 2002
$2.0M
Characterization of V(D)J cleavage and repair complexesR01AI055599 · NIAID · CREIGHTON UNIVERSITY · PI SWANSON, PATRICK C. · 2003 to 2007
$1.1M
Characterization of V(D)J cleavage and repair complexesR56AI055599 · NIAID · CREIGHTON UNIVERSITY · PI SWANSON, PATRICK C. · 2008 to 2009
$650k
NCRR NIH HHS C06 RR017417NCRR NIH HHS C06 RR17417-01NIAID NIH HHS AI055599NIAID NIH HHS R01 AI055599NIAID NIH HHS R56 AI055599
6 · The paper itself

Abstract

Antigen receptor genes are assembled by a site-specific DNA rearrangement process called V(D)J recombination. This process proceeds through two distinct phases: a cleavage phase in which the RAG1 and RAG2 proteins introduce DNA double-strand breaks at antigen receptor gene segments, and a joining phase in which the resulting DNA breaks are processed and repaired via the non-homologous end-joining (NHEJ) repair pathway. Genetic and biochemical evidence suggest that the RAG proteins play an active role in guiding the repair of DNA breaks introduced during V(D)J recombination to the NHEJ pathway. However, evidence for specific association between the RAG proteins and any of the factors involved in NHEJ remains elusive. Here we present evidence that two components of the NHEJ pathway, Ku70 and Ku80, interact with full-length RAG1, providing a biochemical link between the two phases of V(D)J recombination.

Indexed as

Gene RearrangementAntigens, NuclearBinding SitesCell LineDNA-Binding ProteinsHomeodomain ProteinsHumansKu AutoantigenProtein Structure, TertiaryRegulatory Sequences, Nucleic AcidAntigens, NuclearDNA-Binding ProteinsHomeodomain ProteinsKu AutoantigenRAG-1 proteinXrcc6 protein, human

Identifiers

PMID18281312
PMCPMC2330247
OpenAlexW2039547989

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.