Evidence map›Paper›PMID 18268499›Full record

ArticleMolecular psychiatry2009

Evidence for HTR1A and LHPP as interacting genetic risk factors in major depression.

C D Neff, V Abkevich, J C L Packer, Y Chen, J Potter, R Riley, C Davenport, J DeGrado Warren, S Jammulapati, A Bhathena and 7 more

Abstract read
PubMed Publisher
In one paragraph

Article in Molecular psychiatry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed, 1 pooled it
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 1 synthesis or guideline pooled it, 100 citations in OpenAlex.

  1. Pooled it
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  5. Article
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  7. Histidine Phosphorylation: Protein Kinases and Phosphatases.International journal of molecular sciences · 2024
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  17. 5-HT Receptors and the Development of New Antidepressants.International journal of molecular sciences · 2021
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 2 institutions in 1 country.

C D NeffMyriad Genetics, Salt Lake City, UT 84108, USA.
V Abkevich
J C L Packer
Y Chen
J Potter
R Riley
C Davenport
J DeGrado Warren
S Jammulapati
A Bhathena
W S Choi
P E Kroeger
R E Metzger
A Gutin
M H Skolnick
D Shattuck
D A Katz
Myriad Genetics · USAbbott Fund · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The HTR1A -1019C>G genotype was associated with major depression in the Utah population. Linkage analysis on Utah pedigrees with strong family histories of major depression including only cases with the HTR1A -1019G allele revealed a linkage peak on chromosome 10 (maximum HLOD=4.4). Sequencing of all known genes in the linkage region revealed disease-segregating single-nucleotide polymorphisms (SNPs) in LHPP. LHPP SNPs were also associated with major depression in both Utah and Ashkenazi populations. Consistent with the linkage evidence, LHPP associations depended on HTR1A genotype. Lhpp or a product of a collinear brain-specific transcript, therefore, may interact with Htr1a in the pathogenesis of major depression.

Indexed as

Genetic LinkageChromosomes, Human, Pair 10FemaleGenotypeHumansInorganic PyrophosphataseJewsMajor Depressive DisorderMalePedigreePolymorphism, Single NucleotideReceptor, Serotonin, 5-HT1ARisk FactorsUtahInorganic Pyrophosphatasephospholysine phosphohistidine inorganic pyrophosphate phosphatase, humanReceptor, Serotonin, 5-HT1A

Identifiers

PMID18268499
OpenAlexW2059171399

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.