Evidence map›Paper›PMID 18267009›Full record

ArticleBMC immunology2008

Molecular networks discriminating mouse bladder responses to intravesical bacillus Calmette-Guerin (BCG), LPS, and TNF-alpha.

Marcia R Saban, Michael A O'Donnell, Robert E Hurst, Xue-Ru Wu, Cindy Simpson, Igor Dozmorov, Carole Davis, Ricardo Saban

Open access · goldAbstract read
In one paragraph

Article in BMC immunology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
3.7field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 27 citations in OpenAlex.

  1. Adenosine AJournal of inflammation research · 2021
    Article
  2. Article
  3. Bacteria in Cancer Therapy: Renaissance of an Old Concept.International journal of microbiology · 2016
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 1 country.

Marcia R SabanCollege of Medicine, Department of Physiology, Oklahoma University Health Sciences Center (OUHSC), Oklahoma City, OK 73104, USA. marcia-saban@ouhsc.edu
Michael A O'Donnell
Robert E Hurst
Xue-Ru Wu
Cindy Simpson
Igor Dozmorov
Carole Davis
Ricardo Saban
University of Oklahoma · USUniversity of Oklahoma Health Sciences Center · USNew York University · USOklahoma Medical Research Foundation · USUniversity of Iowa · US

Funding

LPS-PEPTIDE INTERACTION IN BLADDER INFLAMMATIONR01DK055828 · NIDDK · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI SABAN, RICARDO · 1998 to 2007
$2.1M
Genes &Proteins of Urothelial-ECM InteractionR01DK069808 · NIDDK · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI HURST, ROBERT EVAN · 2005 to 2009
$1.5M
Bladder transcriptome in experimental inflammationR01DK066101 · NIDDK · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI SABAN, RICARDO · 2003 to 2007
$1.3M
Urothelial cell response to bacterial infectionR21DK062889 · NIDDK · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI HURST, ROBERT EVAN · 2003 to 2004
$293k
NIDDK NIH HHS 5 R01 DK055828-05NIDDK NIH HHS 5 R01 DK066101-02NIDDK NIH HHS R01 DK055828NIDDK NIH HHS R01 DK066101NIDDK NIH HHS R01 DK069808NIDDK NIH HHS R21 DK062889
6 · The paper itself

Abstract

backgroundDespite being a mainstay for treating superficial bladder carcinoma and a promising agent for interstitial cystitis, the precise mechanism of Bacillus Calmette-Guerin (BCG) remains poorly understood. It is particularly unclear whether BCG is capable of altering gene expression in the bladder target organ beyond its well-recognized pro-inflammatory effects and how this relates to its therapeutic efficacy. The objective of this study was to determine differentially expressed genes in the mouse bladder following chronic intravesical BCG therapy and to compare the results to non-specific pro inflammatory stimuli (LPS and TNF-alpha). For this purpose, C57BL/6 female mice received four weekly instillations of BCG, LPS, or TNF-alpha. Seven days after the last instillation, the urothelium along with the submucosa was removed from detrusor muscle and the RNA was extracted from both layers for cDNA array experiments. Microarray results were normalized by a robust regression analysis and only genes with an expression above a conditional threshold of 0.001 (3SD above background) were selected for analysis. Next, genes presenting a 3-fold ratio in regard to the control group were entered in Ingenuity Pathway Analysis (IPA) for a comparative analysis in order to determine genes specifically regulated by BCG, TNF-alpha, and LPS. In addition, the transcriptome was precipitated with an antibody against RNA polymerase II and real-time polymerase chain reaction assay (Q-PCR) was used to confirm some of the BCG-specific transcripts.

resultsMolecular networks of treatment-specific genes generated several hypotheses regarding the mode of action of BCG. BCG-specific genes involved small GTPases and BCG-specific networks overlapped with the following canonical signaling pathways: axonal guidance, B cell receptor, aryl hydrocarbon receptor, IL-6, PPAR, Wnt/beta-catenin, and cAMP. In addition, a specific detrusor network expressed a high degree of overlap with the development of the lymphatic system. Interestingly, TNF-alpha-specific networks overlapped with the following canonical signaling pathways: PPAR, death receptor, and apoptosis. Finally, LPS-specific networks overlapped with the LPS/IL-1 mediated inhibition of RXR. Because NF-kappaB occupied a central position in several networks, we further determined whether this transcription factor was part of the responses to BCG. Electrophoretic mobility shift assays confirmed the participation of NF-kappaB in the mouse bladder responses to BCG. In addition, BCG treatment of a human urothelial cancer cell line (J82) also increased the binding activity of NF-kappaB, as determined by precipitation of the chromatin by a NF-kappaB-p65 antibody and Q-PCR of genes bearing a NF-kappaB consensus sequence. Next, we tested the hypothesis of whether small GTPases such as LRG-47 are involved in the uptake of BCG by the bladder urothelium.

conclusionAs expected, BCG treatment induces the transcription of genes belonging to common pro-inflammatory networks. However, BCG also induces unique genes belonging to molecular networks involved in axonal guidance and lymphatic system development within the bladder target organ. In addition, NF-kappaB seems to play a predominant role in the bladder responses to BCG therapy. Finally, in intact urothelium, BCG-GFP internalizes in LRG-47-positive vesicles. These results provide a molecular framework for the further study of the involvement of immune and nervous systems in the bladder responses to BCG therapy.

Indexed as

AnimalsCystitis, InterstitialFemaleGene Expression RegulationLipopolysaccharidesMiceMycobacterium bovisReverse Transcriptase Polymerase Chain ReactionTranscription, GeneticTumor Necrosis Factor-alphaUrinary BladderUrinary Bladder NeoplasmsUrotheliumLipopolysaccharidesTumor Necrosis Factor-alpha

Identifiers

PMID18267009
PMCPMC2262873
OpenAlexW1965083849

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.