ArticleJournal of applied genetics2008
DcMaster transposon display markers as a tool for diversity evaluation of carrot breeding materials and for hybrid seed purity testing.
Article in Journal of applied genetics, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
8 citing papers in PubMed.
- Detecting Genetic Mobility Using a Transposon-Based Marker System in Gamma-Ray Irradiated Soybean Mutants.Plants (Basel, Switzerland) · 2021Article
- Miniature inverted-repeat transposable elements (MITEs), derived insertional polymorphism as a tool of marker systems for molecular plant breeding.Molecular biology reports · 2020Review
- Development of AhMITE1 markers through genome-wide analysis in peanut (Arachis hypogaea L.).BMC research notes · 2018Article
- Mapping genes governing flower architecture and pollen development in a double mutant population of carrot.Frontiers in plant science · 2014Article
- Mobile element scanning (ME-Scan) identifies thousands of novel Alu insertions in diverse human populations.Genome research · 2013Article
- Universal Multiplex PCR: a novel method of simultaneous amplification of multiple DNA fragments.Plant methods · 2012Article
- Mobile element scanning (ME-Scan) by targeted high-throughput sequencing.BMC genomics · 2010Article
- Diversity of DcMaster-like elements of the PIF/Harbinger superfamily in the carrot genome.Genetica · 2009Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
2 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
In recent years, transposon insertion polymorphisms have been utilized as molecular markers, and a range of techniques tailored towards identification of insertion sites of various transposable elements have been developed. In the present paper we describe the application of a recently developed DcMaster transposon display system to analyse the genetic diversity of Polish breeding materials of carrot (Daucus carota) and to identify polymorphisms useful for hybrid seed purity testing. Using 3 sets of breeding materials (each consisting of the cytoplasmic male sterility stock, the maintainer, the pollinator, and the corresponding F1 hybrid), we identified 56 DcMTD markers. DcMaster insertion sites proved to be highly polymorphic in cultivated carrot, as 79% of all insertion sites differentiated between individual plants. Fourteen stock-specific DcMTD markers were further selected as potentially useful for hybrid seed purity testing.
Indexed as
Identifiers
18263967What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.