Evidence map›Paper›PMID 18261743›Full record

ArticleJournal of molecular biology2008

Structure of the tandem fibronectin type 3 domains of neural cell adhesion molecule.

Federico Carafoli, Jane L Saffell, Erhard Hohenester

Open access · hybridAbstract read
In one paragraph

Article in Journal of molecular biology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed, 1 pooled it
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 1 synthesis or guideline pooled it, 38 citations in OpenAlex.

  1. Pooled it
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  6. FGF/FGFR signaling in health and disease.Signal transduction and targeted therapy · 2020
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Federico CarafoliDepartment of Life Sciences, Biophysics Section, Blackett Laboratory, Imperial College London, London SW7 2AZ, UK.
Jane L Saffell
Erhard Hohenester
Imperial College London · GB

Funding

Biotechnology and Biological Sciences Research Council BB/D524840/1Biotechnology and Biological Sciences Research Council BBD5248401Wellcome Trust 054334
6 · The paper itself

Abstract

Activation of the fibroblast growth factor receptor (FGFR) by neural cell adhesion molecule (NCAM) is essential for NCAM-mediated neurite outgrowth. Previous peptide studies have identified two regions in the fibronectin type 3 (FN3)-like domains of NCAM as being important for these activities. Here we report the crystal structure of the NCAM FN3 domain tandem, which reveals an acutely bent domain arrangement. Mutation of a non-conserved surface residue (M610R) led to a second crystal form showing a substantially different conformation. Thus, the FN3 domain linker is highly flexible, suggesting that it corresponds to the hinge seen in electron micrographs of NCAM. The two putative FGFR1-binding segments, one in each NCAM FN3 domain, are situated close to the domain interface. They form a contiguous patch in the more severely bent conformation but become separated upon straightening of the FN3 tandem, suggesting that conformational changes within NCAM may modulate FGFR1 activation. Surface plasmon resonance experiments demonstrated only a very weak interaction between the NCAM FN3 tandem and soluble FGFR1 proteins expressed in mammalian cells (dissociation constant >100 muM). Thus, the NCAM-FGFR1 interaction at the cell surface is likely to depend upon avidity effects due to receptor clustering.

Indexed as

Amino Acid MotifsAnimalsBinding SitesConserved SequenceCrystallography, X-RayFibronectinsHumansModels, MolecularMolecular Sequence DataMutationNeural Cell Adhesion MoleculesProtein BindingProtein Structure, QuaternaryProtein Structure, TertiaryReceptor, Fibroblast Growth Factor, Type 1Sequence AlignmentFibronectinsNeural Cell Adhesion MoleculesReceptor, Fibroblast Growth Factor, Type 1

Identifiers

PMID18261743
PMCPMC2267215
OpenAlexW2002697786

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.