Evidence map›Paper›PMID 18258667›Full record

ArticleClinical chemistry2008

Array-based resequencing assay for mutations causing hypertrophic cardiomyopathy.

Stephan Waldmüller, Melanie Müller, Kirsten Rackebrandt, Priska Binner, Sven Poths, Michael Bonin, Thomas Scheffold

Open access · bronzeAbstract read
In one paragraph

Article in Clinical chemistry, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 39 citations in OpenAlex.

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  12. Deafness in the genomics era.Hearing research · 2011
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  16. Impact of Mendelian inheritance in cardiovascular disease.Annals of the New York Academy of Sciences · 2010
    Review
  17. Article
  18. Article
  19. Review
  20. A novel custom resequencing array for dilated cardiomyopathy.Genetics in medicine : official journal of the American College of Medical Genetics · 2010
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Stephan WaldmüllerInstitute for Heart and Circulation Research, University of Witten/Herdecke, Dortmund, Germany. waldmueller@herz-kreislaufforschung.de
Melanie Müller
Kirsten Rackebrandt
Priska Binner
Sven Poths
Michael Bonin
Thomas Scheffold
Witten/Herdecke University · DEUniversity of Tübingen · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundDissecting the complex genetic basis of hypertrophic cardiomyopathy (HCM) may be key to both better understanding and optimally managing this most prevalent genetic cardiovascular disease. An array-based resequencing (ABR) assay was developed to facilitate genetic testing in HCM.

methodsAn Affymetrix resequencing array and a single long-range PCR protocol were developed to cover the 3 most commonly affected genes in HCM, MYH7 (myosin, heavy chain 7, cardiac muscle, beta), MYBPC3 (myosin binding protein C, cardiac), and TNNT2 [troponin T type 2 (cardiac)].

resultsThe assay detected the underlying point mutation in 23 of 24 reference samples and provided pointers toward identifying a G insertion and a 3-bp deletion. The comparability of array-based assay results to conventional capillary sequencing was > or =99.9%. Both techniques detected 1 heterozygous variant that was missed by the other method.

conclusionsThe data provide evidence that ABR can substantially reduce the high workload previously associated with a genetic test for HCM. Therefore, the HCM array could facilitate large-scale studies aimed at broadening the understanding of the genetic and phenotypic diversity of HCM and related cardiomyopathies.

Indexed as

Cardiac MyosinsCardiomyopathy, HypertrophicCarrier ProteinsHeterozygoteHumansMyosin Binding Protein CMyosin Heavy ChainsOligonucleotide Array Sequence AnalysisSequence Analysis, DNATroponin TCardiac MyosinsCarrier ProteinsMYH7 protein, humanMyosin Binding Protein CMyosin Heavy ChainsTroponin T

Identifiers

PMID18258667
PMCPMC7108484
OpenAlexW2099731667

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.