Evidence map›Paper›PMID 18253863›Full record

ArticleJournal of biomedical science2008

Chromatin tethering effects of hNopp140 are involved in the spatial organization of nucleolus and the rRNA gene transcription.

Yi-Tzang Tsai, Chen-I Lin, Hung-Kai Chen, Kuo-Ming Lee, Chia-Yi Hsu, Shun-Jen Yang, Ning-Hsing Yeh

Open access · hybridAbstract read
In one paragraph

Article in Journal of biomedical science, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 32 citations in OpenAlex.

  1. Genetic Factors Linking Nucleolar Stress withInternational journal of molecular sciences · 2025
    Article
  2. Article
  3. Roles of NOLC1 in cancers and viral infection.Journal of cancer research and clinical oncology · 2023
    Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. The nucleolus of Caenorhabditis elegans.Journal of biomedicine & biotechnology · 2012
    Review
  13. Article
  14. Imipramine treatment and resiliency exhibit similar chromatin regulation in the mouse nucleus accumbens in depression models.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2009
    Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Yi-Tzang TsaiSchool of Life Science, Institute of Microbiology and Immunology, National Yang-Ming University, 155 Li-Nong Street Sec. 2, Taipei, 112, Taiwan.
Chen-I Lin
Hung-Kai Chen
Kuo-Ming Lee
Chia-Yi Hsu
Shun-Jen Yang
Ning-Hsing Yeh
National Yang Ming Chiao Tung University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The short arms of five human acrocentric chromosomes contain ribosomal gene (rDNA) clusters where numerous mini-nucleoli arise at the exit of mitosis. These small nucleoli tend to coalesce into one or a few large nucleoli during interphase by unknown mechanisms. Here, we demonstrate that the N- and C-terminal domains of a nucleolar protein, hNopp140, bound respectively to alpha-satellite arrays and rDNA clusters of acrocentric chromosomes for nucleolar formation. The central acidic-and-basic repeated domain of hNopp140, possessing a weak self-self interacting ability, was indispensable for hNopp140 to build up a nucleolar round-shaped structure. The N- or the C-terminally truncated hNopp140 caused nucleolar segregation and was able to alter locations of the rDNA transcription, as mediated by detaching the rDNA repeats from the acrocentric alpha-satellite arrays. Interestingly, an hNopp140 mutant, made by joining the N- and C-terminal domains but excluding the entire central repeated region, induced nucleolar disruption and global chromatin condensation. Furthermore, RNAi knockdown of hNopp140 resulted in dispersion of the rDNA and acrocentric alpha-satellite sequences away from nucleolus that was accompanied by rDNA transcriptional silence. Our findings indicate that hNopp140, a scaffold protein, is involved in the nucleolar assembly, fusion, and maintenance.

Indexed as

Cell NucleolusDNA, RibosomalDNA, SatelliteGene SilencingHumansNuclear ProteinsPhosphoproteinsRNA, RibosomalTranscription, GeneticDNA, RibosomalDNA, SatelliteNOLC1 protein, humanNuclear ProteinsPhosphoproteinsRNA, Ribosomal

Identifiers

PMID18253863
PMCPMC2440943
OpenAlexW2089318857

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.