Evidence map›Paper›PMID 18252227›Full record

ArticleAmerican journal of human genetics2008

Structural variation of chromosomes in autism spectrum disorder.

Christian R Marshall, Abdul Noor, John B Vincent, Anath C Lionel, Lars Feuk, Jennifer Skaug, Mary Shago, Rainald Moessner, Dalila Pinto, Yan Ren and 25 more

2 registry-linked trialsOpen access · bronzeAbstract readComparative Study
In one paragraph

Article in American journal of human genetics, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to 2 registered trials, which are not on this map. Cited by 956 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
956citing papers in PubMed, 3 pooled it
112.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT02746445 completednot on this mapstarted 2016, after this paper: background citation

A Longitudinal Study on the Safety and Efficacy for Subjects With Autism Spectrum Disorder (ASD) Who Received Magnetic EEG/ECG-Guided Resonance Therapy (MeRT)

TypeobservationalSponsorWave NeuroscienceRan2016 to 2017Enrolled11ConditionsAutistic DisorderArmsNo intervention
NCT02758496 completednot on this mapstarted 2016, after this paper: background citation

A Chart Review to Evaluate the Safety and Efficacy of Magnetic EEG/ECG-Guided Resonance Therapy (MeRT) on Subjects With Autism Spectrum Disorder (ASD)

TypeobservationalSponsorWave NeuroscienceRan2016 to 2017Enrolled141ConditionsAutistic DisorderArmsMeRT Efficacy Chart Review
3 · Its place in the literature

Who cites it

956 citing papers in PubMed, 3 syntheses or guidelines pooled it, 1,832 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Trial
  5. Genetic and epigenetic signatures associated with plasma oxytocin levels in children and adolescents with autism spectrum disorder.Autism research : official journal of the International Society for Autism Research · 2023
    Trial
  6. Article
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  8. Protocadherin 9 Promotes Cell Survival of Different Bipolar Cell Types in the Developing Mouse Retina.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2026
    Article
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  15. Genetic analysis of neurodegenerative diseases.The Journal of clinical investigation · 2026
    Review
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896 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

35 authors at 12 institutions in 3 countries.

Christian R MarshallThe Centre for Applied Genomics, The Hospital for Sick Children, Department of Molecular and Medical Genetics, University of Toronto, Toronto, Ontario M5G 1L7, Canada.
Abdul Noor
John B Vincent
Anath C Lionel
Lars Feuk
Jennifer Skaug
Mary Shago
Rainald Moessner
Dalila Pinto
Yan Ren
Bhooma Thiruvahindrapduram
Andreas Fiebig
Stefan Schreiber
Jan Friedman
Cees E J Ketelaars
Yvonne J Vos
Can Ficicioglu
Susan Kirkpatrick
Rob Nicolson
Leon Sloman
Anne Summers
Clare A Gibbons
Ahmad Teebi
David Chitayat
Rosanna Weksberg
Ann Thompson
Cathy Vardy
Vicki Crosbie
Sandra Luscombe
Rebecca Baatjes
Lonnie Zwaigenbaum
Wendy Roberts
Bridget Fernandez
Peter Szatmari
Stephen W Scherer
University of Toronto · CAHospital for Sick Children · CAMemorial University of Newfoundland · CACentre for Addiction and Mental Health · CAMcMaster University · CANorth York General Hospital · CAUniversity Medical Center Groningen · NLChildren's Hospital of Philadelphia · USUniversity of Alberta · CAUniversity of British Columbia · CAUniversity of Wisconsin–Madison · USWestern University · CA

Funding

Autism Speaks AS2077
6 · The paper itself

Abstract

Structural variation (copy number variation [CNV] including deletion and duplication, translocation, inversion) of chromosomes has been identified in some individuals with autism spectrum disorder (ASD), but the full etiologic role is unknown. We performed genome-wide assessment for structural abnormalities in 427 unrelated ASD cases via single-nucleotide polymorphism microarrays and karyotyping. With microarrays, we discovered 277 unbalanced CNVs in 44% of ASD families not present in 500 controls (and re-examined in another 1152 controls). Karyotyping detected additional balanced changes. Although most variants were inherited, we found a total of 27 cases with de novo alterations, and in three (11%) of these individuals, two or more new variants were observed. De novo CNVs were found in approximately 7% and approximately 2% of idiopathic families having one child, or two or more ASD siblings, respectively. We also detected 13 loci with recurrent/overlapping CNV in unrelated cases, and at these sites, deletions and duplications affecting the same gene(s) in different individuals and sometimes in asymptomatic carriers were also found. Notwithstanding complexities, our results further implicate the SHANK3-NLGN4-NRXN1 postsynaptic density genes and also identify novel loci at DPP6-DPP10-PCDH9 (synapse complex), ANKRD11, DPYD, PTCHD1, 15q24, among others, for a role in ASD susceptibility. Our most compelling result discovered CNV at 16p11.2 (p = 0.002) (with characteristics of a genomic disorder) at approximately 1% frequency. Some of the ASD regions were also common to mental retardation loci. Structural variants were found in sufficiently high frequency influencing ASD to suggest that cytogenetic and microarray analyses be considered in routine clinical workup.

Indexed as

Chromosome AberrationsPhenotypeAutistic DisorderGene DosageGene RearrangementGenetics, MedicalHumansKaryotypingMicroarray AnalysisPolymorphism, Single Nucleotide

Identifiers

PMID18252227
PMCPMC2426913
OpenAlexW2119907069

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.