Evidence map›Paper›PMID 18245262›Full record

ArticleApplied and environmental microbiology2008

The ygaVP genes of Escherichia coli form a tributyltin-inducible operon.

Hervé Gueuné, Marie-José Durand, Gérald Thouand, Michael S DuBow

Abstract read
In one paragraph

Article in Applied and environmental microbiology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. In the AlphaproteobacteriumAntioxidants (Basel, Switzerland) · 2023
    Article
  3. Review
  4. Article
  5. The Sulfide-Responsive SqrR/BigR Homologous Regulator YgaV ofAntioxidants (Basel, Switzerland) · 2022
    Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Hervé GueunéUniversité de Nantes, CNRS UMR 6144, GEPEA, ERT CBAC, Département Génie Biologique, 18 Bd. Gaston Defferre, 85035 La Roche sur Yon, France.
Marie-José Durand
Gérald Thouand
Michael S DuBow

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A tributyltin (TBT) luxAB transcriptional fusion in Escherichia coli revealed that a TBT-activated promoter is located upstream of two cotranscribed orphan genes, ygaV and ygaP. We demonstrate that transcription from the promoter upstream of ygaVP is constitutive in a ygaVP mutant, suggesting that YgaV is an autoregulated, TBT-inducible repressor.

Indexed as

OperonAcid Anhydride HydrolasesAmino Acid SequenceEscherichia coliEscherichia coli ProteinsGene Expression Regulation, BacterialMolecular Sequence DataMutationPolymerase Chain ReactionPromoter Regions, GeneticRepressor ProteinsSequence Homology, Amino AcidTranscription, GeneticTrialkyltin CompoundsAcid Anhydride HydrolasesEscherichia coli ProteinsRepressor ProteinsRppH protein, E coliTrialkyltin CompoundstributyltinYgaP protein, E coliYgaV protein, E coli

Identifiers

PMID18245262
PMCPMC2268312

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.