Evidence map›Paper›PMID 18244952›Full record

ArticleAmerican journal of respiratory and critical care medicine2008

Sex-stratified linkage analysis identifies a female-specific locus for IgE to cockroach in Costa Ricans.

Gary M Hunninghake, Jessica Lasky-Su, Manuel E Soto-Quirós, Lydiana Avila, Catherine Liang, Stephen L Lake, Thomas J Hudson, Mitzi Spesny, Eduardo Fournier, Jody S Sylvia and 4 more

Registry-linked trialAbstract read
In one paragraph

Article in American journal of respiratory and critical care medicine, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT00021840 (Genetic Epidemiology of Asthma in Costa Rica), which is not on this map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
4.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT00021840 completednot on this map

Genetic Epidemiology of Asthma in Costa Rica

TypeobservationalSponsorBrigham and Women's HospitalRan2001 to 2011Enrolled4,245ConditionsAsthma, Lung Diseases
3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 74 citations in OpenAlex.

  1. Article
  2. Review
  3. From gene identifications to therapeutic targets for asthma: Focus on great potentials ofChinese medical journal pulmonary and critical care medicine · 2023
    Review
  4. Article
  5. Article
  6. A novel locus for exertional dyspnoea in childhood asthma.The European respiratory journal · 2021
    Article
  7. Article
  8. Novel eosinophilic gene expression networks associated with IgE in two distinct asthma populations.Clinical and experimental allergy : journal of the British Society for Allergy and Clinical Immunology · 2018
    Article
  9. Review
  10. Review
  11. Article
  12. Article
  13. Asthma in Hispanics. An 8-year update.American journal of respiratory and critical care medicine · 2014
    Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Cellular and molecular mechanisms of TSLP function in human allergic disorders--TSLP programs the "Th2 code" in dendritic cells.Allergology international : official journal of the Japanese Society of Allergology · 2012
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 3 countries.

Gary M HunninghakeChanning Laboratory, 181 Longwood Avenue, Boston, MA 02115, USA.
Jessica Lasky-Su
Manuel E Soto-Quirós
Lydiana Avila
Catherine Liang
Stephen L Lake
Thomas J Hudson
Mitzi Spesny
Eduardo Fournier
Jody S Sylvia
Nelson B Freimer
Barbara J Klanderman
Benjamin A Raby
Juan C Celedón
Hospital Nacional de Niños · CRBrigham and Women's Hospital · USHarvard University · USOntario Institute for Cancer Research · CAUniversity of California, Los Angeles · US

Funding

THE PHARMACOGENETICS OF ASTHMA TREATMENTU01HL065899 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI TANTISIRA, KELAN G, WEISS, SCOTT T · 2000 to 2014
$38.5M
The Genetic Epidemiology of Asthma in Costa RicaR37HL066289 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI WEISS, SCOTT T · 2007 to 2015
$14.6M
Molecular regulation of cytokine gene expressionP50HL067664 · NHLBI · BETH ISRAEL DEACONESS MEDICAL CENTER · PI KINET, JEAN-PIERRE M · 2002 to 2005
$7.8M
THE GENETIC EPIDEMIOLOGY OF ASTHMA IN COSTA RICAR01HL066289 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI WEISS, SCOTT T · 2001 to 2005
$5.2M
CLINICAL CENTER FOR CAMPN01HR016049 · HR · BRIGHAM AND WOMEN'S HOSPITAL · PI WEISS, SCOTT T · 1991 to 2000
$1.0M
The Genetic Epidemiology of Asthma in Costa RicaK01HL004370 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI CELEDON, JUAN CARLOS · 2001 to 2005
$697k
Fine-mapping Association Analysis of Total IgE on Chr. 20p12 in Costa RicansK08HL092222 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI HUNNINGHAKE, GARY MATTHEW · 2008 to 2012
$689k
Fine mapping of an Asthma Locus of Chromosome 12qK08HL074193 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI RABY, BENJAMIN ALEXANDER · 2003 to 2007
$670k
The Genetic Epidemiology of Asthma in Costa RicaF32HL083634 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI HUNNINGHAKE, GARY MATTHEW · 2006 to 2007
$114k
NHLBI NIH HHS 1F32HL083634NHLBI NIH HHS HL04370NHLBI NIH HHS HL074193NHLBI NIH HHS HL66289NHLBI NIH HHS K08 HL092222NHLBI NIH HHS N01-HR-16049NHLBI NIH HHS P50HL67664NHLBI NIH HHS U01 HL065899NHLBI NIH HHS U01HL065899
6 · The paper itself

Abstract

rationaleThe basis for gender influences on allergen-specific IgEs is unclear.

objectivesTo perform regular and sex-stratified genomewide linkage analyses of IgE to each of three allergens (Ascaris lumbricoides, Blatella germanica [German cockroach]), and Dermatophagoides pteronyssinus [dust mite]) and to conduct an association study of a candidate gene in a linked genomic region.

methodsGenomewide linkage analyses of allergen-specific IgEs were conducted in 653 members of eight large families of Costa Rican children with asthma. An analysis of the association between single-nucleotide polymorphisms in thymic stromal lymphopoietin (TSLP) and IgE measurements was conducted in 417 parent-child trios in Costa Rica. Significant results were replicated in 470 families of white children in the Childhood Asthma Management Program (CAMP). MEASUREMENTS AND MAIN

resultsAmong all subjects, there was suggestive evidence of linkage (LOD >/= 2.72) to IgE to Ascaris (on chromosome 7q) and IgE to dust mite (on chromosomes 7p and 12q). In a sex-stratified analysis, there was significant evidence of linkage to IgE to cockroach on chromosome 5q23 (peak LOD, 4.14 at 127 cM) in female subjects. TSLP is located within the 1.5 LOD-unit support interval for this linkage peak and has female-specific effects on lung disease in mice. In a sex-stratified analysis, the T allele of single-nucleotide polymorphism rs2289276 in TSLP was associated with reductions in IgE to cockroach (in Costa Rican girls) and total IgE (in girls in Costa Rica and in CAMP; P value for sex-by-genotype interaction, <0.01 in both studies).

conclusionsConsistent with findings in murine models, a variant in TSLP may have female-specific effects on allergic phenotypes.

Indexed as

AdolescentAdultAgedAged, 80 and overAllergensAnimalsAsthmaChildCockroachesCosta RicaCytokinesFemaleGenetic LinkageGenetic Predisposition to DiseaseHumansImmunoglobulin EAllergensCytokinesImmunoglobulin EThymic Stromal Lymphopoietin

Identifiers

PMID18244952
PMCPMC2292826
OpenAlexW2089321729

What OpenQuestion holds

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.