ArticleMarine biotechnology (New York, N.Y.)
Comparative analysis of expressed sequence tag (EST) libraries in the seagrass Zostera marina subjected to temperature stress.
Article in Marine biotechnology (New York, N.Y.). The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.
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20 citing papers in PubMed.
- Single-molecule real-time sequencing of the full-length transcriptome of Halophila beccarii.Scientific reports · 2022Article
- Overexpression of seagrass DnaJ genePhysiology and molecular biology of plants : an international journal of functional plant biology · 2021Article
- Contrasting patterns of divergence at the regulatory and sequence level in EuropeanEcology and evolution · 2019Article
- Which Genes in a Typical Intertidal Seagrass (Frontiers in plant science · 2018Article
- Respiratory oxygen consumption in the seagrassMarine biology · 2017Article
- Optimum Temperatures for Net Primary Productivity of Three Tropical Seagrass Species.Frontiers in plant science · 2017Article
- The emergence of molecular profiling and omics techniques in seagrass biology; furthering our understanding of seagrasses.Functional & integrative genomics · 2016Review
- Light Levels Affect Carbon Utilisation in Tropical Seagrass under Ocean Acidification.PloS one · 2016Article
- Genome-wide survey of the seagrass Zostera muelleri suggests modification of the ethylene signalling network.Journal of experimental botany · 2015Article
- De novo assembly and characterization of the transcriptome of seagrass Zostera marina using Illumina paired-end sequencing.PloS one · 2014Article
- Acclimation to different depths by the marine angiosperm Posidonia oceanica: transcriptomic and proteomic profiles.Frontiers in plant science · 2013Article
- Establishing research strategies, methodologies and technologies to link genomics and proteomics to seagrass productivity, community metabolism, and ecosystem carbon fluxes.Frontiers in plant science · 2013Article
- Immune gene discovery by expressed sequence tag (EST) analysis of hemocytes in the ridgetail white prawn Exopalaemon carinicauda.Fish & shellfish immunology · 2013Article
- Identification and analysis of muscle-related protein isoforms expressed in the white muscle of the mandarin fish (Siniperca chuatsi).Marine biotechnology (New York, N.Y.) · 2011Article
- Back to the sea twice: identifying candidate plant genes for molecular evolution to marine life.BMC evolutionary biology · 2011Article
- Identification of immune genes of the Agamaki clam (Sinonovacula constricta) by sequencing and bioinformatic analysis of ESTs.Marine biotechnology (New York, N.Y.) · 2010Article
- Identification and expression analysis of genes involved in early ovary development in diploid gynogenetic hybrids of red crucian carp x common carp.Marine biotechnology (New York, N.Y.) · 2010Article
- Dr. Zompo: an online data repository for Zostera marina and Posidonia oceanica ESTs.Database : the journal of biological databases and curation · 2009Article
- Functional annotation and analysis of expressed sequence tags from the hepatopancreas of mitten crab (Eriocheir sinensis).Marine biotechnology (New York, N.Y.)Article
- Identification of genes involved in immune response, microsatellite, and SNP markers from expressed sequence tags generated from hemocytes of freshwater pearl mussel (Hyriopsis cumingii).Marine biotechnology (New York, N.Y.)Article
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10 authors.
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Abstract
Global warming is associated with increasing stress and mortality on temperate seagrass beds, in particular during periods of high sea surface temperatures during summer months, adding to existing anthropogenic impacts, such as eutrophication and habitat destruction. We compare several expressed sequence tag (EST) in the ecologically important seagrass Zostera marina (eelgrass) to elucidate the molecular genetic basis of adaptation to environmental extremes. We compared the tentative unigene (TUG) frequencies of libraries derived from leaf and meristematic tissue from a control situation with two experimentally imposed temperature stress conditions and found that TUG composition is markedly different among these conditions (all P < 0.0001). Under heat stress, we find that 63 TUGs are differentially expressed (d.e.) at 25 degrees C compared with lower, no-stress condition temperatures (4 degrees C and 17 degrees C). Approximately one-third of d.e. eelgrass genes were characteristic for the stress response of the terrestrial plant model Arabidopsis thaliana. The changes in gene expression suggest complex photosynthetic adjustments among light-harvesting complexes, reaction center subunits of photosystem I and II, and components of the dark reaction. Heat shock encoding proteins and reactive oxygen scavengers also were identified, but their overall frequency was too low to perform statistical tests. In all conditions, the most abundant transcript (3-15%) was a putative metallothionein gene with unknown function. We also find evidence that heat stress may translate to enhanced infection by protists. A total of 210 TUGs contain one or more microsatellites as potential candidates for gene-linked genetic markers. Data are publicly available in a user-friendly database at http://www.uni-muenster.de/Evolution/ebb/Services/zostera .
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