Evidence map›Paper›PMID 18232732›Full record

ArticlePLoS medicine2008

A prevalent variant in PPP1R3A impairs glycogen synthesis and reduces muscle glycogen content in humans and mice.

David B Savage, Lanmin Zhai, Balasubramanian Ravikumar, Cheol Soo Choi, Johanna E Snaar, Amanda C McGuire, Sung-Eun Wou, Gemma Medina-Gomez, Sheene Kim, Cheryl B Bock and 12 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PLoS medicine, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
0.8field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 56 citations in OpenAlex.

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  14. Gys1 Antisense Therapy Prevents Disease-Driving Aggregates and Epileptiform Discharges in a Lafora Disease Mouse Model.Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics · 2023
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

22 authors at 9 institutions in 2 countries.

David B SavageDepartment of Clinical Biochemistry and Medicine, University of Cambridge, Cambridge, United Kingdom.
Lanmin Zhai
Balasubramanian Ravikumar
Cheol Soo Choi
Johanna E Snaar
Amanda C McGuire
Sung-Eun Wou
Gemma Medina-Gomez
Sheene Kim
Cheryl B Bock
Dyann M Segvich
Bhavana Solanky
Dinesh Deelchand
Antonio Vidal-Puig
Nicholas J Wareham
Gerald I Shulman
Fredrik Karpe
Roy Taylor
Bartholomew A Pederson
Peter J Roach
Stephen O'Rahilly
Anna A DePaoli-Roach
Indiana University – Purdue University Indianapolis · USUniversity of Cambridge · GBHoward Hughes Medical Institute · USIndiana University School of MedicineNewcastle University · GBDuke Medical Center · USMRC Human Nutrition Research · GBUniversity of Nottingham · GBUniversity of Oxford · GB

Funding

Yale Mouse Metabolic Phenotyping CenterU24DK059635 · NIDDK · YALE UNIVERSITY · PI SHULMAN, GERALD I · 2001 to 2015
$8.9M
Mechanisms of Lipid-Induced Hepatic Insulin ResistanceR01DK040936 · NIDDK · YALE UNIVERSITY · PI SHULMAN, GERALD I · 1989 to 2015
$5.1M
STRUCTURE &REGULATION OF TYPE 1 PROTEIN PHOSPHATASESR01DK036569 · NIDDK · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI DEPAOLI-ROACH, ANNA A · 1986 to 2004
$1.3M
Medical Research Council G0400192Medical Research Council G0600717Medical Research Council MC_U106179471NIDDK NIH HHS R01 DK036569NIDDK NIH HHS R01-DK036569NIDDK NIH HHS R01 DK040936NIDDK NIH HHS R01 DK-40936NIDDK NIH HHS U24 DK059635NIDDK NIH HHS U24 DK-59635Wellcome Trust
6 · The paper itself

Abstract

backgroundStored glycogen is an important source of energy for skeletal muscle. Human genetic disorders primarily affecting skeletal muscle glycogen turnover are well-recognised, but rare. We previously reported that a frameshift/premature stop mutation in PPP1R3A, the gene encoding RGL, a key regulator of muscle glycogen metabolism, was present in 1.36% of participants from a population of white individuals in the UK. However, the functional implications of the mutation were not known. The objective of this study was to characterise the molecular and physiological consequences of this genetic variant. METHODS AND

findingsIn this study we found a similar prevalence of the variant in an independent UK white population of 744 participants (1.46%) and, using in vivo (13)C magnetic resonance spectroscopy studies, demonstrate that human carriers (n = 6) of the variant have low basal (65% lower, p = 0.002) and postprandial muscle glycogen levels. Mice engineered to express the equivalent mutation had similarly decreased muscle glycogen levels (40% lower in heterozygous knock-in mice, p < 0.05). In muscle tissue from these mice, failure of the truncated mutant to bind glycogen and colocalize with glycogen synthase (GS) decreased GS and increased glycogen phosphorylase activity states, which account for the decreased glycogen content.

conclusionsThus, PPP1R3A C1984DeltaAG (stop codon 668) is, to our knowledge, the first prevalent mutation described that directly impairs glycogen synthesis and decreases glycogen levels in human skeletal muscle. The fact that it is present in approximately 1 in 70 UK whites increases the potential biomedical relevance of these observations.

Indexed as

Codon, NonsenseFrameshift MutationAdultAnimalsDiabetes Mellitus, Type 2FemaleGene FrequencyGlycogenGlycogen PhosphorylaseGlycogen SynthaseHumansMaleMiceMice, TransgenicMiddle AgedMolecular Sequence DataCodon, NonsenseGlycogenGlycogen PhosphorylaseGlycogen SynthasePhosphoprotein PhosphatasesPPP1R3A protein, humanPPP1R3A protein, mouse

Identifiers

PMID18232732
PMCPMC2214798
OpenAlexW2018230644

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.