Evidence map›Paper›PMID 18227159›Full record

ArticleInfection and immunity2008

Mining the Moraxella catarrhalis genome: identification of potential vaccine antigens expressed during human infection.

Elizabeth A Ruckdeschel, Charmaine Kirkham, Alan J Lesse, Zihua Hu, Timothy F Murphy

Open access · greenAbstract read
In one paragraph

Article in Infection and immunity, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
4.6field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 54 citations in OpenAlex.

  1. Review
  2. The characterization ofMicrobial genomics · 2022
    Article
  3. Synchrony in serum antibody response to conserved proteins ofHuman vaccines & immunotherapeutics · 2020
    Article
  4. Review
  5. Review
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Vaccine targets against Moraxella catarrhalis.Expert opinion on therapeutic targets · 2016
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Panel 5: Microbiology and immunology panel.Otolaryngology--head and neck surgery : official journal of American Academy of Otolaryngology-Head and Neck Surgery · 2013
    Review
  18. Panel 6: Vaccines.Otolaryngology--head and neck surgery : official journal of American Academy of Otolaryngology-Head and Neck Surgery · 2013
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Elizabeth A RuckdeschelDepartment of Microbiology, University at Buffalo, State University of New York, Buffalo, New York, USA.
Charmaine Kirkham
Alan J Lesse
Zihua Hu
Timothy F Murphy
VA Western New York Healthcare System · USUniversity at Buffalo, State University of New York · US

Funding

PATHOGENESIS OF BRANHAMELLA CATARRHALIS INFECTIONSR01AI028304 · NIAID · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI MURPHY, TIMOTHY F · 1989 to 2009
$2.6M
Pathogenesis of Moraxella catarrhalis in chronic obstructive pulmonary diseaseR56AI028304 · NIAID · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI MURPHY, TIMOTHY F · 2010 to 2010
$396k
NIAID NIH HHS AI28304NIAID NIH HHS R01 AI028304NIAID NIH HHS R56 AI028304
6 · The paper itself

Abstract

Moraxella catarrhalis is an important cause of respiratory infections in adults and otitis media in children. Developing an effective vaccine would reduce the morbidity, mortality, and costs associated with such infections. An unfinished genome sequence of a strain of M. catarrhalis available in the GenBank database was analyzed, and open reading frames predicted to encode potential vaccine candidates were identified. Three genes encoding proteins having molecular masses of approximately 22, 75, and 78 kDa (designated Msp [Moraxella surface proteins]) (msp22, msp75, and msp78, respectively) were determined to be conserved by competitive hybridization using a microarray, PCR, and sequencing of the genes in clinical isolates of M. catarrhalis. The genes were transcribed when M. catarrhalis was grown in vitro. These genes were amplified by PCR and cloned into Escherichia coli expression vectors. Recombinant proteins were generated and then studied using enzyme-linked immunosorbent assays with preacquisition and postclearance serum and sputum samples from 31 adults with chronic obstructive pulmonary disease (COPD) who acquired and cleared M. catarrhalis. New antibody responses to the three proteins were observed for a small proportion of the patients with COPD, indicating that these proteins were expressed during human infection. These studies indicate that the Msp22, Msp75, and Msp78 proteins, whose genes were discovered using genome mining, are highly conserved among strains, are expressed during human infection with M. catarrhalis, and represent potential vaccine antigens.

Indexed as

Antibodies, BacterialAntigens, BacterialBacterial VaccinesDNA, BacterialGene Expression Regulation, BacterialGenome, BacterialHumansImmunoglobulin AImmunoglobulin GMoraxella catarrhalisMoraxellaceae InfectionsPulmonary Disease, Chronic ObstructiveRecombinant ProteinsSputumAntibodies, BacterialAntigens, BacterialBacterial VaccinesDNA, BacterialImmunoglobulin AImmunoglobulin GRecombinant Proteins

Identifiers

PMID18227159
PMCPMC2292845
OpenAlexW2166879904

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.