Evidence map›Paper›PMID 18227150›Full record

ArticleMolecular and cellular biology2008

Nap1 links transcription elongation, chromatin assembly, and messenger RNP complex biogenesis.

Brian C Del Rosario, Lucy F Pemberton

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 34 citations in OpenAlex.

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  10. Review
  11. Histone density is maintained during transcription mediated by the chromatin remodeler RSC and histone chaperone NAP1 in vitro.Proceedings of the National Academy of Sciences of the United States of America · 2012
    Article
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  18. Histone chaperones in nucleosome eviction and histone exchange.Current opinion in structural biology · 2008
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Brian C Del RosarioCenter for Cell Signaling, University of Virginia, Charlottesville, VA 22908, USA.
Lucy F Pemberton
University of Virginia · US

Funding

HISTONE NUCLEAR IMPORT AND CHROMATIN ASSEMBLYR01GM065385 · NIGMS · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI PEMBERTON, LUCY F · 2002 to 2010
$2.7M
NIGMS NIH HHS R01 GM065385NIGMS NIH HHS R01 GM65385
6 · The paper itself

Abstract

Chromatin remodeling is central to the regulation of transcription elongation. We demonstrate that the conserved Saccharomyces cerevisiae histone chaperone Nap1 associates with chromatin. We show that Nap1 regulates transcription of PHO5, and the increase in transcript level and the higher phosphatase activity plateau observed for Deltanap1 cells suggest that the net function of Nap1 is to facilitate nucleosome reassembly during transcription elongation. To further our understanding of histone chaperones in transcription elongation, we identified factors that regulate the function of Nap1 in this process. One factor investigated is an essential mRNA export and TREX complex component, Yra1. Nap1 interacts directly with Yra1 and genetically with other TREX complex components and the mRNA export factor Mex67. Additionally, we show that the recruitment of Nap1 to the coding region of actively transcribed genes is Yra1 dependent and that its recruitment to promoters is TREX complex independent. These observations suggest that Nap1 functions provide a new connection between transcription elongation, chromatin assembly, and messenger RNP complex biogenesis.

Indexed as

Acid PhosphataseCell Cycle ProteinsChromatin Assembly and DisassemblyGene Expression Regulation, FungalMultiprotein ComplexesNuclear ProteinsNucleocytoplasmic Transport ProteinsNucleosome Assembly Protein 1NucleosomesOpen Reading FramesProtein Interaction MappingRibonucleoproteinsRNA-Binding ProteinsRNA, FungalRNA, MessengerRNA Polymerase IIAcid PhosphataseCell Cycle ProteinsMEX67 protein, S cerevisiaeMultiprotein ComplexesNAP1 protein, S cerevisiaeNuclear ProteinsNucleocytoplasmic Transport ProteinsNucleosome Assembly Protein 1NucleosomesPHO5 protein, S cerevisiaeRibonucleoproteinsRNA-Binding ProteinsRNA, FungalRNA, MessengerRNA Polymerase IIRNA PrecursorsSaccharomyces cerevisiae ProteinsYRA1 protein, S cerevisiae

Identifiers

PMID18227150
PMCPMC2268417
OpenAlexW2156947774

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.