Evidence map›Paper›PMID 18227067›Full record

ArticleThe Journal of biological chemistry2008

Role of S3 and S4 transmembrane domain charged amino acids in channel biogenesis and gating of KCa2.3 and KCa3.1.

Yajuan Gao, Cavita K Chotoo, Corina M Balut, Fei Sun, Mark A Bailey, Daniel C Devor

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 36 citations in OpenAlex.

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  16. Role of ubiquitylation and USP8-dependent deubiquitylation in the endocytosis and lysosomal targeting of plasma membrane KCa3.1.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2011
    Article
  17. Article
  18. Article
  19. Role of the ubiquitin system in regulating ion transport.Pflugers Archiv : European journal of physiology · 2011
    Article
  20. ESCRT-dependent targeting of plasma membrane localized KCa3.1 to the lysosomes.American journal of physiology. Cell physiology · 2010
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Yajuan GaoDepartment of Cell Biology and Physiology, University of Pittsburgh School of Medicine, Pittsburgh, PA 15261,USA.
Cavita K Chotoo
Corina M Balut
Fei Sun
Mark A Bailey
Daniel C Devor
University of Pittsburgh · US

Funding

Oxidation and Pharmacologic Activation of IK/SK ChannelsR01HL083060 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI DEVOR, DANIEL C · 2006 to 2009
$1.4M
NHLBI NIH HHS HL 083060
6 · The paper itself

Abstract

The role of positively charged arginines in the fourth transmembrane domain (S4) and a single negatively charged amino acid in the third transmembrane domain (S3) on channel biogenesis and gating of voltage-gated K(+) channels (Kv) has been well established. Both intermediate (KCa3.1) and small (KCa2.x) conductance, Ca(2+)-activated K(+) channels have two conserved arginines in S4 and a single conserved glutamic acid in S3, although these channels are voltage-independent. We demonstrate that mutation of any of these charged amino acids in KCa3.1 or KCa2.3 to alanine, glutamine, or charge reversal mutations results in a rapid degradation (<30 min) of total protein, confirming the critical role of these amino acids in channel biogenesis. Mutation of the S4 arginine closest to the cytosolic side of KCa3.1 to histidine resulted in expression at the cell surface. Excised patch clamp experiments revealed that this Arg/His mutation had a dramatically reduced open probability (P(o)), relative to wild type channels. Additionally, we demonstrate, using a combination of short hairpin RNA, dominant negative, and co-immunoprecipitation studies, that both KCa3.1 and KCa2.3 are translocated out of the endoplasmic reticulum associated with Derlin-1. These misfolded channels are poly-ubiquitylated, recognized by p97, and targeted for proteasomal degradation. Our results suggest that S3 and S4 charged amino acids play an evolutionarily conserved role in the biogenesis and gating of KCa channels. Furthermore, these improperly folded K(+) channels are translocated out of the endoplasmic reticulum in a Derlin-1- and p97-dependent fashion, poly-ubiquitylated, and targeted for proteasomal degradation.

Indexed as

Amino AcidsAmino Acid SubstitutionCell MembraneEndoplasmic ReticulumHumansIntermediate-Conductance Calcium-Activated Potassium ChannelsIon Channel GatingMembrane ProteinsMutation, MissensePatch-Clamp TechniquesProteasome Endopeptidase ComplexProtein FoldingProtein Structure, TertiaryProtein TransportSmall-Conductance Calcium-Activated Potassium ChannelsTNF Receptor-Associated Factor 2Amino AcidsDERL1 protein, humanIntermediate-Conductance Calcium-Activated Potassium ChannelsKCNN3 protein, humanKCNN4 protein, humanMembrane ProteinsProteasome Endopeptidase ComplexPSMD2 protein, humanSmall-Conductance Calcium-Activated Potassium ChannelsTNF Receptor-Associated Factor 2Tumor Necrosis Factor Receptor-Associated Peptides and ProteinsUbiquitin

Identifiers

PMID18227067
PMCPMC2431042
OpenAlexW2094915640

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.