Evidence map›Paper›PMID 18222919›Full record

ArticleThe Journal of biological chemistry2008

Identification of ligand specificity determinants in AgrC, the Staphylococcus aureus quorum-sensing receptor.

Edward Geisinger, Elizabeth A George, John Chen, Tom W Muir, Richard P Novick

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
2.9field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 91 citations in OpenAlex.

  1. Review
  2. Molecular Mechanisms of Virulence Regulation inAccounts of chemical research · 2025
    Article
  3. Determinants of maturation of theJournal of bacteriology · 2024
    Article
  4. Article
  5. Quorum-sensingeLife · 2024
    Article
  6. Quorum-sensingbioRxiv : the preprint server for biology · 2024
    Article
  7. Article
  8. Review
  9. Review
  10. Chemical and biomolecular insights into theIsrael journal of chemistry · 2023
    Article
  11. Article
  12. Biofilms and Benign Colonic Diseases.International journal of molecular sciences · 2022
    Review
  13. Engineering ofInternational journal of molecular sciences · 2022
    Article
  14. Article
  15. Review
  16. Review
  17. Review
  18. Multistep Signaling in Nature: A Close-Up ofInternational journal of molecular sciences · 2021
    Review
  19. Article
  20. Review
4 · The record

Corrections and comments

  • Erratum issued
    Chen, John [added]
5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Edward GeisingerMolecular Pathogenesis Program and Departments of Microbiology and Medicine, the Kimmel Center for Biology and Medicine of the Skirball Institute, New York University School of Medicine, New York, NY 10016, USA.
Elizabeth A George
John Chen
Tom W Muir
Richard P Novick
New York University · USRockefeller University · US

Funding

MEDICAL SCIENTIST TRAININGT32GM007308 · NIGMS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI PHILIPS, MARK REID · 1985 to 2019
$23.2M
PEPTIDE AUTOINDUCERS OF STAPHYLOCOCCAL PATHOGENICITYR01AI042783 · NIAID · PRINCETON UNIVERSITY · PI MUIR, TOM · 1998 to 2021
$7.9M
NIAID NIH HHS R01 AI 42783NIGMS NIH HHS 5T32 GM 07308
6 · The paper itself

Abstract

Activation of the agr system, a major regulator of staphylococcal virulence, is initiated by the binding of a specific autoinducing peptide (AIP) to the extracellular domain of AgrC, a classical receptor histidine protein kinase. There are four known agr specificity groups in Staphylococcus aureus, and we have previously localized the determinant of AIP receptor specificity to the C-terminal half of the AgrC sensor domain. We have now identified the specific amino acid residues that determine ligand activation specificity for agr groups I and IV, the two most closely related. Comparison of the AgrC-I and AgrC-IV sequences revealed a set of five divergent residues in the region of the second extracellular loop of the receptor that could be responsible. Accordingly, we exchanged these residues between AgrC-I and AgrC-IV and tested the resulting constructs for activation by the respective AIPs, measuring activation kinetics with a transcriptional fusion of blaZ to the principal agr promoter, P3. Exchange of all five residues caused a complete switch in receptor specificity. Replacement of two of the AgrC-IV residues by the corresponding residues in AgrC-I caused the receptor to be activated by AIP-I nearly as well as the wild type AgrC-I receptor. Replacement of two different AgrC-I residues by the corresponding AgrC-IV residues broadened receptor recognition specificity to include both AIPs. Various types of intermediate activity were observed with other replacement mutations. Preliminary characterization of the AgrC-I-AIP-I interaction suggests that ligand specificity may be sterically determined.

Indexed as

Amino Acid SubstitutionBacterial ProteinsHistidine KinaseKineticsLigandsPeptides, CyclicProtein BindingProtein KinasesProtein Structure, SecondaryProtein Structure, TertiaryQuorum SensingStaphylococcus aureusAgrD protein, StaphylococcusBacterial ProteinsHistidine KinaseLigandsPeptides, CyclicProtein Kinases

Identifiers

PMID18222919
PMCPMC2276371
OpenAlexW1993688512

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.