Evidence map›Paper›PMID 18222096›Full record

ArticleNeuroImage2008

Automated ventricular mapping with multi-atlas fluid image alignment reveals genetic effects in Alzheimer's disease.

Yi-Yu Chou, Natasha Leporé, Greig I de Zubicaray, Owen T Carmichael, James T Becker, Arthur W Toga, Paul M Thompson

Abstract readValidation Study
In one paragraph

Article in NeuroImage, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed.

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  16. Combined effects of Alzheimer risk variants in the CLU and ApoE genes on ventricular expansion patterns in the elderly.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2014
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  17. Article
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  20. Cerebrospinal fluid Aβ levels correlate with structural brain changes in Parkinson's disease.Movement disorders : official journal of the Movement Disorder Society · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Yi-Yu ChouLaboratory of Neuro Imaging, Department of Neurology, UCLA School of Medicine, 635 Charles E. Young Drive South, Suite 225E, Los Angeles, CA, USA.
Natasha LeporéLaboratory of Neuro Imaging, Department of Neurology, UCLA School of Medicine, 635 Charles E. Young Drive South, Suite 225E, Los Angeles, CA, USA.
Greig I de ZubicarayCentre for Magnetic Resonance, University of Queensland, Brisbane, Australia.
Owen T CarmichaelDepartments of Neurology and Computer Science, University of California, Davis, CA, USA.
James T BeckerDepartment of Neurology and Alzheimer's Disease Research Center, University of Pittsburgh Medical Center, Pittsburgh, PA, USA.
Arthur W TogaLaboratory of Neuro Imaging, Department of Neurology, UCLA School of Medicine, 635 Charles E. Young Drive South, Suite 225E, Los Angeles, CA, USA.
Paul M ThompsonLaboratory of Neuro Imaging, Department of Neurology, UCLA School of Medicine, 635 Charles E. Young Drive South, Suite 225E, Los Angeles, CA, USA. Electronic address: thompson@loni.ucla.edu.

Funding

TREATMENT OF DEPRESSION IN ALZHEIMER'S DISEASEP50AG005133 · NIA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI BECKER, JAMES T. · 1985 to 2019
$43.0M
UCLA ALZHEIMERS DISEASE RESEARCH CENTERP50AG016570 · NIA · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI GRILL, JOSHUA · 1999 to 2014
$25.9M
YALE CENTER FOR THE: LEARNING &ATTENTIONP41RR013642 · NCRR · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI GEE, JAMES C · 1998 to 2011
$21.9M
Age Moderates HIV-Related CNS DysfunctionR01AG021431 · NIA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI BECKER, JAMES T. · 2002 to 2005
$1.4M
"MR Morphometrics and Cognitive Decline Rate in Large-Scale Aging Studies"K01AG030514 · NIA · UNIVERSITY OF CALIFORNIA AT DAVIS · PI CARMICHAEL, OWEN T. · 2008 to 2012
$495k
Novel PDEs for Cortical Mapping and Analysis in DiseaseR21RR019771 · NCRR · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI THOMPSON, PAUL M · 2003 to 2004
$351k
NCRR NIH HHS P41 RR013642NCRR NIH HHS P41 RR13642NCRR NIH HHS R21 RR019771NCRR NIH HHS RR019771NIA NIH HHS AG016570NIA NIH HHS AG021431NIA NIH HHS K01 AG030514NIA NIH HHS P50 AG005133NIA NIH HHS P50 AG016570NIA NIH HHS R01 AG021431NIBIB NIH HHS EB01651
6 · The paper itself

Abstract

We developed and validated a new method to create automated 3D parametric surface models of the lateral ventricles in brain MRI scans, providing an efficient approach to monitor degenerative disease in clinical studies and drug trials. First, we used a set of parameterized surfaces to represent the ventricles in four subjects' manually labeled brain MRI scans (atlases). We fluidly registered each atlas and mesh model to MRIs from 17 Alzheimer's disease (AD) patients and 13 age- and gender-matched healthy elderly control subjects, and 18 asymptomatic ApoE4-carriers and 18 age- and gender-matched non-carriers. We examined genotyped healthy subjects with the goal of detecting subtle effects of a gene that confers heightened risk for Alzheimer's disease. We averaged the meshes extracted for each 3D MR data set, and combined the automated segmentations with a radial mapping approach to localize ventricular shape differences in patients. Validation experiments comparing automated and expert manual segmentations showed that (1) the Hausdorff labeling error rapidly decreased, and (2) the power to detect disease- and gene-related alterations improved, as the number of atlases, N, was increased from 1 to 9. In surface-based statistical maps, we detected more widespread and intense anatomical deficits as we increased the number of atlases. We formulated a statistical stopping criterion to determine the optimal number of atlases to use. Healthy ApoE4-carriers and those with AD showed local ventricular abnormalities. This high-throughput method for morphometric studies further motivates the combination of genetic and neuroimaging strategies in predicting AD progression and treatment response.

Indexed as

Brain MappingMagnetic Resonance ImagingAgedAlzheimer DiseaseApolipoprotein E4Atlases as TopicCerebral VentriclesFemaleHumansImaging, Three-DimensionalMaleModels, StatisticalApolipoprotein E4

Identifiers

PMID18222096
PMCPMC2720413

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.