Evidence map›Paper›PMID 18218623›Full record

ArticleThe Journal of biological chemistry2008

Characterization of the gating brake in the I-II loop of Ca(v)3.2 T-type Ca(2+) channels.

Imilla I Arias-Olguín, Iuliia Vitko, Michal Fortuna, Joel P Baumgart, Svetlana Sokolova, Igor A Shumilin, Amy Van Deusen, Manuel Soriano-García, Juan C Gomora, Edward Perez-Reyes

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed.

  1. Trial
  2. Article
  3. Contribution ofFrontiers in psychiatry · 2022
    Article
  4. Cdk5-Dependent Phosphorylation of CaThe Journal of neuroscience : the official journal of the Society for Neuroscience · 2020
    Article
  5. Genetic T-type calcium channelopathies.Journal of medical genetics · 2020
    Review
  6. Article
  7. Article
  8. Article
  9. Calmodulin regulates CaThe Journal of biological chemistry · 2017
    Article
  10. Evolutionary insights into T-type CaThe Journal of general physiology · 2017
    Article
  11. Article
  12. Phosphorylation of the Cav3.2 T-type calcium channel directly regulates its gating properties.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  13. Article
  14. Review
  15. Ins and outs of T-channel structure function.Pflugers Archiv : European journal of physiology · 2014
    Review
  16. Article
  17. Article
  18. Article
  19. The role of a voltage-dependent Ca2+ channel intracellular linker: a structure-function analysis.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2012
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Imilla I Arias-OlguínDepartment of Pharmacology, University of Virginia, Charlottesville, VA 22908, USA.
Iuliia Vitko
Michal Fortuna
Joel P Baumgart
Svetlana Sokolova
Igor A Shumilin
Amy Van Deusen
Manuel Soriano-García
Juan C Gomora
Edward Perez-Reyes

Funding

MOLECULAR ANALYSIS OF NEURONAL T TYPE CALCIUM CHANNELSR01NS038691 · NINDS · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI PEREZ-REYES, EDWARD · 1999 to 2007
$2.7M
NINDS NIH HHS NS 038691
6 · The paper itself

Abstract

Mutations in the I-II loop of Ca(v)3.2 channels were discovered in patients with childhood absence epilepsy. All of these mutations increased the surface expression of the channel, whereas some mutations, and in particular C456S, altered the biophysical properties of channels. Deletions around C456S were found to produce channels that opened at even more negative potentials than control, suggesting the presence of a gating brake that normally prevents channel opening. The goal of the present study was to identify the minimal sequence of this brake and to provide insights into its structure. A peptide fragment of the I-II loop was purified from bacteria, and its structure was analyzed by circular dichroism. These results indicated that the peptide had a high alpha-helical content, as predicted from secondary structure algorithms. Based on homology modeling, we hypothesized that the proximal region of the I-II loop may form a helix-loop-helix structure. This model was tested by mutagenesis followed by electrophysiological measurement of channel gating. Mutations that disrupted the helices, or the loop region, had profound effects on channel gating, shifting both steady state activation and inactivation curves, as well as accelerating channel kinetics. Mutations designed to preserve the helical structure had more modest effects. Taken together, these studies showed that any mutations in the brake, including C456S, disrupted the structural integrity of the brake and its function to maintain these low voltage-activated channels closed at resting membrane potentials.

Indexed as

Ion Channel GatingAmino Acid SequenceCalcium Channels, T-TypeCell LineConserved SequenceElectrophysiologyHumansModels, MolecularMolecular Sequence DataMutationPatch-Clamp TechniquesProtein Structure, SecondarySequence AlignmentCACNA1H protein, humanCalcium Channels, T-Type

Identifiers

PMID18218623
PMCPMC2276388

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.