Evidence map›Paper›PMID 18214461›Full record

ArticleEuropean biophysics journal : EBJ2008

Thermal fluctuations of DNA enclosed by glycerol-water glassy matrices: an elastic neutron scattering investigation.

E Cornicchi, S Capponi, M Marconi, G Onori, A Paciaroni

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Article in European biophysics journal : EBJ, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.2field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 5 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

E CornicchiDipartimento di Fisica dell'Università di Perugia, CEMIN (Centro di Eccellenza per i Materiali Innovativi Nanostrutturati) and INFM CRS-SOFT, Via Pascoli, 06123 Perugia, Italy. elena.cornicchi@fisica.unipg.it
S Capponi
M Marconi
G Onori
A Paciaroni
Istituto Nazionale di Fisica Nucleare, Sezione di Perugia · ITUniversity of Perugia · ITDonostia International Physics Center · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Through elastic neutron scattering measurements, we investigated the thermal fluctuations of DNA enclosed by glycerol-water glassy matrices, at different levels of hydration, over the wide temperature range from 20 to 300 K. For all the samples, the extracted hydrogen mean square displacements (MSD) show a purely vibrational harmonic trend at very low temperatures, and a first onset of anharmonic dynamics above approximately 100 K. Such onset is consistent with the activation of DNA methyl group rotational motions. Then, at a certain temperature Td, the MSD show a second onset of anharmonicity, which corresponds to the DNA dynamical transition. The Td values vary as a function of the hydration degree of the environment. The crucial role of the solvent mobility to activate the DNA thermal fluctuations is proposed, together with a preferential hydration effect of the DNA phosphate groups. Finally, a comparison between the average mobility of homologous samples of DNA and the lysozyme protein is considered.

Indexed as

Neutron DiffractionAnimalsDNAElasticityGlycerolMovementMuramidaseTransition TemperatureWaterDNAGlycerolMuramidaseWater

Identifiers

PMID18214461
OpenAlexW2165043717

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.