Evidence map›Paper›PMID 18212041›Full record

ArticleMolecular and cellular biology2008

Yeast Est2p affects telomere length by influencing association of Rap1p with telomeric chromatin.

Hong Ji, Christopher J Adkins, Bethany R Cartwright, Katherine L Friedman

Open access · greenAbstract readComparative Study
In one paragraph

Article in Molecular and cellular biology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 16 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Hong JiVanderbilt University, Department of Biological Sciences, 1161 21st Ave. S, Nashville, TN 37235, USA.
Christopher J Adkins
Bethany R Cartwright
Katherine L Friedman
Vanderbilt University · US

Funding

Howard Hughes Medical Institute 52003905
6 · The paper itself

Abstract

In Saccharomyces cerevisiae, the sequence-specific binding of the negative regulator Rap1p provides a mechanism to measure telomere length: as the telomere length increases, the binding of additional Rap1p inhibits telomerase activity in cis. We provide evidence that the association of Rap1p with telomeric DNA in vivo occurs in part by sequence-independent mechanisms. Specific mutations in EST2 (est2-LT) reduce the association of Rap1p with telomeric DNA in vivo. As a result, telomeres are abnormally long yet bind an amount of Rap1p equivalent to that observed at wild-type telomeres. This behavior contrasts with that of a second mutation in EST2 (est2-up34) that increases bound Rap1p as expected for a strain with long telomeres. Telomere sequences are subtly altered in est2-LT strains, but similar changes in est2-up34 telomeres suggest that sequence abnormalities are a consequence, not a cause, of overelongation. Indeed, est2-LT telomeres bind Rap1p indistinguishably from the wild type in vitro. Taken together, these results suggest that Est2p can directly or indirectly influence the binding of Rap1p to telomeric DNA, implicating telomerase in roles both upstream and downstream of Rap1p in telomere length homeostasis.

Indexed as

Carrier ProteinsChromatinChromosomes, FungalDNA-Binding ProteinsDNA, FungalDNA HelicasesGene SilencingMutation, MissenseProtein BindingRecombinant Fusion ProteinsRepressor ProteinsRNASaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsShelterin ComplexTelomeraseCarrier ProteinsChromatinDNA-Binding ProteinsDNA, FungalDNA HelicasesEST2 protein, S cerevisiaePIF1 protein, S cerevisiaeRAP1 protein, S cerevisiaeRecombinant Fusion ProteinsRepressor ProteinsRIF1 protein, S cerevisiaeRIF2 protein, S cerevisiaeRNARNA, recombinantSaccharomyces cerevisiae ProteinsShelterin ComplexTelomerasetelomerase RNATelomere-Binding ProteinsTranscription Factors

Identifiers

PMID18212041
PMCPMC2268414
OpenAlexW2145050384

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.