Evidence map›Paper›PMID 18209058›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2008

An MHC class II restriction bias in CD4 T cell responses toward I-A is altered to I-E in DM-deficient mice.

Paula R Menges, Scott A Jenks, Elizabeth K Bikoff, David R Friedmann, Zackery A G Knowlden, Andrea J Sant

Abstract read
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Enhanced Proliferation of Ly6CJournal of immunology (Baltimore, Md. : 1950) · 2021
    Article
  2. Review
  3. The melting pot of the MHC II peptidome.Current opinion in immunology · 2016
    Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Paula R MengesDavid H. Smith Center for Vaccine Biology and Immunology, AaB Institute of Biomedical Sciences, Department of Microbiology and Immunology, University of Rochester, Rochester, NY 14642, USA.
Scott A Jenks
Elizabeth K Bikoff
David R Friedmann
Zackery A G Knowlden
Andrea J Sant

Funding

MULTIDISCIPLINARY TRAINING IN PULMONARY RESEARCHT32HL066988 · NHLBI · UNIVERSITY OF ROCHESTER · PI GEORAS, STEVE N, O'REILLY, MICHAEL A · 2001 to 2021
$8.1M
The T32 Predoctoral Training Program in Immunology (PTPI)T32AI007285 · NIAID · UNIVERSITY OF ROCHESTER · PI Scott Andrew Gerber, JACQUES Robert · 1986 to 2026
$7.6M
Immunodominance in CD4 T Cell ResponsesR01AI051542 · NIAID · UNIVERSITY OF ROCHESTER · PI SANT, ANDREA JANINE · 2002 to 2012
$3.6M
INHERITED CONTROL MECHANISMS IN IG GENE EXPRESSIONR37AI019047 · NIAID · HARVARD UNIVERSITY · PI BIKOFF, ELIZABETH K · 1994 to 2003
$1.7M
Selective Presentation of Autoantigens by B CellsR21AI059898 · NIAID · UNIVERSITY OF ROCHESTER · PI SANT, ANDREA JANINE · 2004 to 2005
$470k
INHERITED CONTROL MECHANISMS IN IG GENE EXPRESSIONR01AI019047 · NIAID · MOUNT SINAI SCHOOL OF MEDICINE OF CUNY · PI BIKOFF, ELIZABETH K · 1985 to 1993
–
NHLBI NIH HHS T32 HL066988NHLBI NIH HHS T32 HL 66988NIAID NIH HHS AI I 19047NIAID NIH HHS R01 AI051542NIAID NIH HHS R01 AI 51542NIAID NIH HHS R21 AI 059898NIAID NIH HHS R21 AI059898NIAID NIH HHS R37 AI019047NIAID NIH HHS T32 AI 007285NIAID NIH HHS T32 AI007285Wellcome Trust
6 · The paper itself

Abstract

The MHC-encoded cofactor DM catalyzes endosomal loading of peptides onto MHC class II molecules. Despite evidence from in vitro experiments that DM acts to selectively edit the repertoire of class II:peptide complexes, the consequence of DM expression in vivo, or a predictive pattern of DM activity in the specificity of CD4 T cell responses has remained unresolved. Therefore, to characterize DM function in vivo we used wild-type (WT) or DM-deficient (DM(-/-)) mice of the H-2(d) MHC haplotype and tested the hypothesis that DM promotes narrowing of the repertoire of class II:peptide complexes displayed by APC, leading to a correspondingly selective CD4 T cell response. Surprisingly, our results indicated that DM(-/-) mice do not exhibit a broadened CD4 T cell response relative to WT mice, but rather shift their immunodominance pattern to new peptides, a pattern associated with a change in class II isotype-restriction. Specifically, we found that CD4 T cell responses in WT mice were primarily restricted to the I-A class II molecule, whereas DM(-/-) mice recognize peptides in the context of I-E. The observed shift in isotype-restriction appeared to be due in part to a modification in the peripheral CD4 T cell repertoire available for peptide recognition.

Indexed as

Amino Acid SequenceAnimalsCD4-Positive T-LymphocytesCytokinesEscherichia coli ProteinsH-2 AntigensHaplotypesHistocompatibility Antigens Class IIHLA-D AntigensImmunodominant EpitopesImmunoglobulin IsotypesMiceMice, Mutant StrainsMolecular Sequence DataPeptidesPeriplasmic Binding ProteinsCytokinesEscherichia coli ProteinsH-2 AntigensHistocompatibility Antigens Class IIHLA-D AntigensHLA-DM antigensImmunodominant EpitopesImmunoglobulin IsotypesMalE protein, E coliPeptidesPeriplasmic Binding Proteins

Identifiers

PMID18209058
PMCPMC2981066

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.