Evidence map›Paper›PMID 18209038›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2008

The ontogeny and fate of NK cells marked by permanent DNA rearrangements.

Kristy Pilbeam, Per Basse, Laurent Brossay, Nikola Vujanovic, Rachel Gerstein, Abbe N Vallejo, Lisa Borghesi

Open access · bronzeAbstract read
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 39 citations in OpenAlex.

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  15. CD1d-unrestricted NKT cells are endowed with a hybrid function far superior than that of iNKT cells.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  16. Article
  17. Review
  18. Review
  19. Versatility in NK cell memory.Immunology and cell biology · 2011
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 1 country.

Kristy PilbeamDepartment of Immunology, University of Pittsburgh School of Medicine, 200 Lothrop Street, Pittsburgh, PA 15261, USA.
Per Basse
Laurent Brossay
Nikola Vujanovic
Rachel Gerstein
Abbe N Vallejo
Lisa Borghesi
University of Pittsburgh · USUPMC Hillman Cancer Center · USBrown University · USChildren's Hospital of Pittsburgh · USUniversity of Massachusetts Chan Medical School · US

Funding

Pilot ResearchP20CA103730 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI CHATTA, GURKAMAL S · 2003 to 2007
$3.2M
REGULATION OF V(D)J RECOMBINATION IN B CELL DEVELOPMENTR01AI043534 · NIAID · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI GERSTEIN, RACHEL M. · 2000 to 2011
$3.1M
Pathways of T cell SenescenceR01AG022379 · NIA · MAYO CLINIC COLL OF MEDICINE, ROCHESTER · PI DE VALLEJO, ABBE N · 2003 to 2009
$1.8M
Impaired Tumoricidal Activity Of DCs in HNC PatientsR01DE014775 · NIDCR · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI VUJANOVIC, NIKOLA LAZAR · 2002 to 2006
$1.6M
Functions of the KLRG1 molecule on NK cells and T cellsR01AI058181 · NIAID · BROWN UNIVERSITY · PI BROSSAY, LAURENT · 2004 to 2008
$1.5M
Cytokine Delivery By Tumor-Seeking LymphocytesR01CA104560 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI BASSE, PER H. · 2004 to 2006
$672k
Clonal analysis of joint-infiltrating natural Killer cells in chronic arthritisR03AR054529 · NIAMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI BORGHESI, LISA · 2007 to 2009
$212k
NCI NIH HHS P20 CA 103730NCI NIH HHS P20 CA103730NCI NIH HHS R01 CA 104560NCI NIH HHS R01 CA104560NIAID NIH HHS R01 AI 043534NIAID NIH HHS R01 AI043534NIAID NIH HHS R01 AI058181NIAID NIH HHS R01 AI 58181NIAMS NIH HHS R03 AR 054529NIAMS NIH HHS R03 AR054529NIA NIH HHS R01 AG022379NIA NIH HHS R01 AG 023379NIDCR NIH HHS R01 DE014775NIDCR NIH HHS R01 DE 14775
6 · The paper itself

Abstract

A subset of NK cells bears incomplete V(D)J rearrangements, but neither the consequence to cell activities nor the precise developmental stages in which recombination occurs is known. These are important issues, as recombination errors cause cancers of the B and T lineages. Using transgenic recombination reporter mice to examine NK cell dynamics in vivo, we show that recombination(+) NK cells have distinct developmental patterns in the BM, including reduced homeostatic proliferation and diminished Stat5 phosphorylation. In the periphery, both recombination(+) and recombination(-) NK cells mediate robust functional responses including IFN-gamma production, cytolysis, and tumor homing, suggesting that NK cells with distinct developmental histories can be found together in the periphery. We also show that V(D)J rearrangement marks both human cytolytic (CD56(dim)) and immunoregulatory (CD56(bright)) populations, demonstrating the distribution of permanent DNA rearrangements across major NK cell subsets in man. Finally, direct quantification of rag transcripts throughout NK cell differentiation in both mouse and man establishes the specific developmental stages that are susceptible to V(D)J rearrangement. Together, these data demonstrate that multipotent progenitors rather than lineage-specified NK progenitors are targets of V(D)J recombination and that NK cells bearing the relics of earlier V(D)J rearrangements have different developmental dynamics but robust biological capabilities in vivo.

Indexed as

Gene RearrangementAnimalsCD56 AntigenCell LineageDNA-Binding ProteinsHomeodomain ProteinsHumansKiller Cells, NaturalMiceMice, TransgenicMultipotent Stem CellsPhosphorylationRecombination, GeneticSTAT5 Transcription FactorVDJ RecombinasesCD56 AntigenDNA-Binding ProteinsHomeodomain ProteinsRAG-1 proteinRag2 protein, mouseSTAT5 Transcription FactorVDJ Recombinases

Identifiers

PMID18209038
PMCPMC4465768
OpenAlexW1762417975

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.