Evidence map›Paper›PMID 18208525›Full record

ArticleThe Plant journal : for cell and molecular biology2008

Mutations of genes in synthesis of the carotenoid precursors of ABA lead to pre-harvest sprouting and photo-oxidation in rice.

Jun Fang, Chenglin Chai, Qian Qian, Chunlai Li, Jiuyou Tang, Lei Sun, Zejun Huang, Xiaoli Guo, Changhui Sun, Min Liu and 8 more

Open access · bronzeAbstract read
In one paragraph

Article in The Plant journal : for cell and molecular biology, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 109 papers.

0numbers the graph read from it
0cells of the map it votes in
109citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

109 citing papers in PubMed, 285 citations in OpenAlex.

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49 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 6 institutions in 1 country.

Jun FangState Key Laboratory of Plant Genomics and National Centre for Plant Gene Research, Beijing 100101, China.
Chenglin Chai
Qian Qian
Chunlai Li
Jiuyou Tang
Lei Sun
Zejun Huang
Xiaoli Guo
Changhui Sun
Min Liu
Yan Zhang
Qingtao Lu
Yiqin Wang
Congming Lu
Bin Han
Fan Chen
Zhukuan Cheng
Chengcai Chu
Chinese Academy of Sciences · CNInstitute of Botany · CNChinese Academy of Agricultural Sciences · CNInstitute of Biophysics · CNInstitute of Genetics and Developmental Biology · CNNational Center for Gene Research · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pre-harvest sprouting (PHS) or vivipary in cereals is an important agronomic trait that results in significant economic loss. A considerable number of mutations that cause PHS have been identified in several species. However, relatively few viviparous mutants in rice (Oryza sativa L.) have been reported. To explore the mechanism of PHS in rice, we carried out an extensive genetic screening and identified 12 PHS mutants (phs). Based on their phenotypes, these phs mutants were classified into three groups. Here we characterize in detail one of these groups, which contains mutations in genes encoding major enzymes of the carotenoid biosynthesis pathway, including phytoene desaturase (OsPDS), zeta-carotene desaturase (OsZDS), carotenoid isomerase (OsCRTISO) and lycopene beta-cyclase (beta-OsLCY), which are essential for the biosynthesis of carotenoid precursors of ABA. As expected, the amount of ABA was reduced in all four phs mutants compared with that in the wild type. Chlorophyll fluorescence analysis revealed the occurrence of photoinhibition in the photosystem and decreased capacity for eliminating excess energy by thermal dissipation. The greatly increased activities of reactive oxygen species (ROS) scavenging enzymes, and reduced photosystem (PS) II core proteins CP43, CP47 and D1 in leaves of the Oscrtiso/phs3-1mutant and OsLCY RNAi transgenic rice indicated that photo-oxidative damage occurred in PS II, consistent with the accumulation of ROS in these plants. These results suggest that the impairment of carotenoid biosynthesis causes photo-oxidation and ABA-deficiency phenotypes, of which the latter is a major factor controlling the PHS trait in rice.

Indexed as

Abscisic AcidCarotenoidsCloning, MolecularGene Expression Regulation, PlantGenes, PlantGerminationMutationOryzaOxidation-ReductionSeedsAbscisic AcidCarotenoids

Identifiers

PMID18208525
PMCPMC2327239
OpenAlexW2051064866

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.