ArticleTheory in biosciences = Theorie in den Biowissenschaften2005
Evolutionary patterns of non-coding RNAs.
Article in Theory in biosciences = Theorie in den Biowissenschaften, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
32 citing papers in PubMed, 74 citations in OpenAlex.
- Stress-induced vtRNA1-1 modulates redox homeostasis and ferroptosis susceptibility in hepatocellular carcinoma cells.Redox biology · 2026Article
- TRIM21 modulates stability of pro-survival non-coding RNA vtRNA1-1 in human hepatocellular carcinoma cells.PLoS genetics · 2025Article
- Article
- A guide to naming human non-coding RNA genes.The EMBO journal · 2020Review
- Differential transcription profiles of long non-coding RNAs in primary human brain microvascular endothelial cells in response to meningitic Escherichia coli.Scientific reports · 2016Article
- Functional and Structural Characterization of FAU Gene/Protein from Marine Sponge Suberites domuncula.Marine drugs · 2015Article
- Non-coding RNAs' partitioning in the evolution of photosynthetic organisms via energy transduction and redox signaling.RNA biology · 2015Article
- ptRNApred: computational identification and classification of post-transcriptional RNA.Nucleic acids research · 2014Article
- Mutation rates and evolution of multiple coding in RNA-based protocells.Journal of molecular evolution · 2014Article
- Identification and characterisation of non-coding small RNAs in the pathogenic filamentous fungus Trichophyton rubrum.BMC genomics · 2013Article
- Genome-scale NCRNA homology search using a Hamming distance-based filtration strategy.BMC bioinformatics · 2012Article
- Evolution of the let-7 microRNA family.RNA biology · 2012Article
- Identification of miRNAs in sorghum by using bioinformatics approach.Plant signaling & behavior · 2012Article
- Structural and functional characterization of ribosomal protein gene introns in sponges.PloS one · 2012Article
- From snoRNA to miRNA: Dual function regulatory non-coding RNAs.Biochimie · 2011Review
- Characterizing ncRNAs in Human Pathogenic Protists Using High-Throughput Sequencing Technology.Frontiers in genetics · 2011Article
- Female-biased expression of long non-coding RNAs in domains that escape X-inactivation in mouse.BMC genomics · 2010Article
- Article
- Non-coding RNA annotation of the genome of Trichoplax adhaerens.Nucleic acids research · 2009Article
- Evolution of spliceosomal snRNA genes in metazoan animals.Journal of molecular evolution · 2008Article
Corrections and comments
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Authors and funding
15 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
A plethora of new functions of non-coding RNAs (ncRNAs) have been discovered in past few years. In fact, RNA is emerging as the central player in cellular regulation, taking on active roles in multiple regulatory layers from transcription, RNA maturation, and RNA modification to translational regulation. Nevertheless, very little is known about the evolution of this "Modern RNA World" and its components. In this contribution, we attempt to provide at least a cursory overview of the diversity of ncRNAs and functional RNA motifs in non-translated regions of regular messenger RNAs (mRNAs) with an emphasis on evolutionary questions. This survey is complemented by an in-depth analysis of examples from different classes of RNAs focusing mostly on their evolution in the vertebrate lineage. We present a survey of Y RNA genes in vertebrates and study the molecular evolution of the U7 snRNA, the snoRNAs E1/U17, E2, and E3, the Y RNA family, the let-7 microRNA (miRNA) family, and the mRNA-like evf-1 gene. We furthermore discuss the statistical distribution of miRNAs in metazoans, which suggests an explosive increase in the miRNA repertoire in vertebrates. The analysis of the transcription of ncRNAs suggests that small RNAs in general are genetically mobile in the sense that their association with a hostgene (e.g. when transcribed from introns of a mRNA) can change on evolutionary time scales. The let-7 family demonstrates, that even the mode of transcription (as intron or as exon) can change among paralogous ncRNA.
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.