Evidence map›Paper›PMID 18201786›Full record

ArticleJournal of microbiological methods2008

The utility of affinity-tags for detection of a streptococcal protein from a variety of streptococcal species.

Meixian Zhou, Paula Fives-Taylor, Hui Wu

Open access · greenAbstract read
In one paragraph

Article in Journal of microbiological methods, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.3field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Caries-Associated Biosynthetic Gene Clusters inJournal of dental research · 2020
    Article
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  13. Cyclic di-AMP mediates biofilm formation.Molecular microbiology · 2016
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Meixian ZhouDepartment of Pediatric Dentistry and Microbiology, University of Alabama at Birmingham, Birmingham, AL 35294,USA.
Paula Fives-Taylor
Hui Wu
University of Vermont · USUniversity of Alabama at Birmingham · US

Funding

Glycosylation & Function of an Oral Streptococcal AdhesinR01DE017954 · NIDCR · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI WU, HUI · 2007 to 2022
$5.8M
Genetic Analysis-Adhesion of S Sanguis to S PellicleR01DE011000 · NIDCR · UNIVERSITY OF VERMONT &ST AGRIC COLLEGE · PI WU, HUI · 2004 to 2008
$2.1M
Glycosylation &Biogenesis of Streptococcal FimbriaeK22DE014726 · NIDCR · UNIVERSITY OF VERMONT &ST AGRIC COLLEGE · PI WU, HUI · 2003 to 2007
$621k
NIDCR NIH HHS K22 DE014726NIDCR NIH HHS R01 DE011000NIDCR NIH HHS R01 DE017954NIDCR NIH HHS R01 DE11000
6 · The paper itself

Abstract

There is no systematic examination of affinity tag utility in Gram-positive bacteria, which limits the investigation of protein function in this important group of bacteria as specific antibodies for many of native proteins are generally not available. In this study, we utilized an E. coli-streptococcal shuttle vector pVT1666 and constructed two sets of expression plasmids pVPT-CTag and pVPT-NTag, with each set containing five affinity tags (GST, GFP, HSV, T7 and Nano) that can be fused to either the C- or N-terminus of a target protein. A putative glycosyltransferase (Gtf2) essential for Fap1 glycosylation was used to demonstrate the utility of the cassettes in detection of Gtf2 fusion proteins, and the biological relevance of the proteins in our working strain Streptococcus parasanguinis. GFP and T7 tags were readily expressed in S. parasanguinis as either an N- or C-terminal fusion to Gtf2. Only the C- terminal fusion of GST and HSV were able to be identified in S. parasanguinis. The Nano tag was not detected in either E. coli or S. parasanguinis. Genetic complementation experiments indicated that all the tagged Gtf2 fusion proteins could restore the Gtf2 function in the null mutant except for the Nano-tagged Gtf2 at its N-terminal fusion. Using a T7-tagged Gtf2 fusion construct, we demonstrated that the fusion cassette is also useful in detection of the fusion tag expression in other streptococci including S. mutans, S. pneumoniae and S. sanguinis. Therefore, the expression cassettes we constructed will be a useful tool not only to investigate protein-protein interactions in Fap1 biogenesis in S. parasanguinis, but also to study protein functions in other gram-positive bacteria in which pVT1666 replicates.

Indexed as

Bacterial ProteinsEscherichia coliGene DeletionGenes, ReporterGenetic Complementation TestGenetic VectorsGlucosyltransferasesRecombinant Fusion ProteinsStaining and LabelingStreptococcusBacterial ProteinsGlucosyltransferasesRecombinant Fusion Proteins

Identifiers

PMID18201786
PMCPMC2435255
OpenAlexW2050462562

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.