Evidence map›Paper›PMID 18195009›Full record

ArticleThe Journal of biological chemistry2008

The transcriptional repressor activator protein Rap1p is a direct regulator of TATA-binding protein.

Mourad Bendjennat, P Anthony Weil

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.4field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. Validation of Appropriate Reference Genes for qRT-PCR Normalization in Oat (International journal of molecular sciences · 2022
    Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Mourad BendjennatDepartment of Molecular Physiology and Biophysics, Vanderbilt University, School of Medicine, Nashville, TN 37232-0615, USA.
P Anthony Weil
Vanderbilt University · US

Funding

MOLECULAR GENETIC ANALYSIS OF YEAST TAFSR01GM052461 · NIGMS · VANDERBILT UNIVERSITY · PI WEIL, PETER ANTHONY · 1995 to 2011
$6.2M
Molecular Genetic Analysis of Yeast TAFsR56GM052461 · NIGMS · VANDERBILT UNIVERSITY · PI WEIL, PETER ANTHONY · 2007 to 2007
$500k
NIGMS NIH HHS GM 52461NIGMS NIH HHS R01 GM052461
6 · The paper itself

Abstract

Essentially all nuclear eukaryotic gene transcription depends upon the function of the transcription factor TATA-binding protein (TBP). Here we show that the abundant, multifunctional DNA binding transcription factor repressor activator protein Rap1p interacts directly with TBP. TBP-Rap1p binding occurs efficiently in vivo at physiological expression levels, and in vitro analyses confirm that this is a direct interaction. The DNA binding domains of the two proteins mediate interaction between TBP and Rap1p. TBP-Rap1p complex formation inhibits TBP binding to TATA promoter DNA. Alterations in either Rap1p or TBP levels modulate mRNA gene transcription in vivo. We propose that Rap1p represents a heretofore unrecognized regulator of TBP.

Indexed as

Gene Expression Regulation, FungalDNA, FungalModels, MolecularNucleic Acid ConformationProtein BindingProtein Structure, QuaternaryProtein Structure, TertiaryRNA, MessengerSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsShelterin ComplexTATA-Box Binding ProteinTelomere-Binding ProteinsTranscription FactorsTranscription, GeneticUp-RegulationDNA, FungalRAP1 protein, S cerevisiaeRNA, MessengerSaccharomyces cerevisiae ProteinsShelterin ComplexTATA-Box Binding ProteinTelomere-Binding ProteinsTranscription Factors

Identifiers

PMID18195009
PMCPMC2417159
OpenAlexW2086065602

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.