Evidence map›Paper›PMID 18193043›Full record

SynthesisNature genetics2008

Newly identified loci that influence lipid concentrations and risk of coronary artery disease.

Cristen J Willer, Serena Sanna, Anne U Jackson, Angelo Scuteri, Lori L Bonnycastle, Robert Clarke, Simon C Heath, Nicholas J Timpson, Samer S Najjar, Heather M Stringham and 40 more

Open access · greenAbstract readMeta-Analysis
In one paragraph

Synthesis in Nature genetics, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 897 papers, 14 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
897citing papers in PubMed, 14 pooled it
113.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

897 citing papers in PubMed, 14 syntheses or guidelines pooled it, 1,598 citations in OpenAlex.

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  4. The promising novel therapies for familial hypercholesterolemia.Journal of clinical laboratory analysis · 2022
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  11. Biotechnology Approaches for the Treatment of Dyslipidemia.Cardiovascular drugs and therapy · 2021
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  17. Identifying the Lipidomic Effects of a Rare Loss-of-Function Deletion inCirculation. Genomic and precision medicine · 2021
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837 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

50 authors at 16 institutions in 6 countries.

Cristen J WillerCenter for Statistical Genetics, Department of Biostatistics, University of Michigan, 1420 Washington Heights, Ann Arbor, Michigan 48109, USA.
Serena Sanna
Anne U Jackson
Angelo Scuteri
Lori L Bonnycastle
Robert Clarke
Simon C Heath
Nicholas J Timpson
Samer S Najjar
Heather M Stringham
James Strait
William L Duren
Andrea Maschio
Fabio Busonero
Antonella Mulas
Giuseppe Albai
Amy J Swift
Mario A Morken
Narisu Narisu
Derrick Bennett
Sarah Parish
Haiqing Shen
Pilar Galan
Pierre Meneton
Serge Hercberg
Diana Zelenika
Wei-Min Chen
Yun Li
Laura J Scott
Paul A Scheet
Jouko Sundvall
Richard M Watanabe
Ramaiah Nagaraja
Shah Ebrahim
Debbie A Lawlor
Yoav Ben-Shlomo
George Davey-Smith
Alan R Shuldiner
Rory Collins
Richard N Bergman
Manuela Uda
Jaakko Tuomilehto
Antonio Cao
Francis S Collins
Edward Lakatta
G Mark Lathrop
Michael Boehnke
David Schlessinger
Karen L Mohlke
Gonçalo R Abecasis
University of Michigan–Ann Arbor · USInstitute of Genetic and Biomedical Research · ITNational Institute on Aging · USNational Human Genome Research Institute · USUniversity of Bristol · GBUniversity of Oxford · GBCommissariat à l'Énergie Atomique et aux Énergies Alternatives · FRUniversity of Maryland, Baltimore · USUniversity of Southern California · USCentre de Recherche en Nutrition Humaine d'Auvergne · FRCentre de Recherche en Nutrition Humaine Rhône-Alpes · FRFinnish Institute for Health and Welfare · FIInserm · FRInstitute for Molecular Medicine Finland · FILondon School of Hygiene & Tropical Medicine · GBUniversity of North Carolina at Chapel Hill · US

Funding

Genetic analysis of type II diabetes in Finnish populationZIAHG000024 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI ERDOS, MICHAEL · 2009 to 2025
$38.2M
Targeted Genetic Analysis of T2D and Quantitative TraitsR01DK072193 · NIDDK · UNIV OF NORTH CAROLINA CHAPEL HILL · PI KAREN L. MOHLKE · 2005 to 2026
$11.3M
QUANTITATION OF FACTORS REGULATING GLUCOSE TOLERANCER01DK029867 · NIDDK · UNIVERSITY OF SOUTHERN CALIFORNIA · PI MARILYN ADER · 1986 to 2026
$11.0M
Aging-related Traits and Disease Risk Factors in a Sardinian Population CohortZIAAG000675 · NIA · NATIONAL INSTITUTE ON AGING · PI GOROSPE, MYRIAM · 2009 to 2021
$5.7M
GENOTYPING FOR LOCATING HUMAN DISEASE GENESN01HG065403 · NHGRI · JOHNS HOPKINS UNIVERSITY · PI VALLE, DAVID L · 1996 to 2000
$1.7M
EXCITATION-CONTRACTION COUPLING IN THE HYPERTHYROID HEARTZ01AG000235 · NIA · NATIONAL INSTITUTE ON AGING · PI LAKATTA, EDWARD · 1986 to 2008
$99k
Intramural NIH HHS Z01 AG000235Medical Research Council G0600705Medical Research Council G9815508Medical Research Council MC_U137686857NHGRI NIH HHS N01 HG065403NHGRI NIH HHS N01-HG-65403)NIDDK NIH HHS R01 DK029867NIDDK NIH HHS R01 DK072193Wellcome TrustWellcome Trust 076113
6 · The paper itself

Abstract

To identify genetic variants influencing plasma lipid concentrations, we first used genotype imputation and meta-analysis to combine three genome-wide scans totaling 8,816 individuals and comprising 6,068 individuals specific to our study (1,874 individuals from the FUSION study of type 2 diabetes and 4,184 individuals from the SardiNIA study of aging-associated variables) and 2,758 individuals from the Diabetes Genetics Initiative, reported in a companion study in this issue. We subsequently examined promising signals in 11,569 additional individuals. Overall, we identify strongly associated variants in eleven loci previously implicated in lipid metabolism (ABCA1, the APOA5-APOA4-APOC3-APOA1 and APOE-APOC clusters, APOB, CETP, GCKR, LDLR, LPL, LIPC, LIPG and PCSK9) and also in several newly identified loci (near MVK-MMAB and GALNT2, with variants primarily associated with high-density lipoprotein (HDL) cholesterol; near SORT1, with variants primarily associated with low-density lipoprotein (LDL) cholesterol; near TRIB1, MLXIPL and ANGPTL3, with variants primarily associated with triglycerides; and a locus encompassing several genes near NCAN, with variants strongly associated with both triglycerides and LDL cholesterol). Notably, the 11 independent variants associated with increased LDL cholesterol concentrations in our study also showed increased frequency in a sample of coronary artery disease cases versus controls.

Indexed as

AllelesCase-Control StudiesCholesterol, HDLCholesterol, LDLCohort StudiesComputer SimulationCoronary Artery DiseaseGene FrequencyGenetic VariationGenome, HumanHaplotypesHumansLikelihood FunctionsLipidsMarkov ChainsPolymorphism, Single NucleotideCholesterol, HDLCholesterol, LDLLipidsTriglycerides

Identifiers

PMID18193043
PMCPMC5206900
OpenAlexW2142769596

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.