Evidence map›Paper›PMID 18191648›Full record

ArticleBiochimica et biophysica acta2008

Terminal RNA uridylyltransferases of trypanosomes.

Ruslan Aphasizhev, Inna Aphasizheva

Abstract read
In one paragraph

Article in Biochimica et biophysica acta, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Mitochondrial RNA processing in trypanosomes.Research in microbiology · 2011
    Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Structure of a mitochondrial ribosome with minimal RNA.Proceedings of the National Academy of Sciences of the United States of America · 2009
    Article
  12. Article
  13. Article
  14. Article
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Ruslan AphasizhevDepartment of Microbiology and Molecular Genetics, School of Medicine, University of California, Irvine, CA 92697-4025, USA. ruslan@uci.edu
Inna Aphasizheva

Funding

RNA Uridylytransferases of TrypanosomesR01AI064653 · NIAID · UNIVERSITY OF CALIFORNIA-IRVINE · PI AFASIZHEV, RUSLAN · 2005 to 2009
$1.8M
NIAID NIH HHS AI064653NIAID NIH HHS R01 AI064653
6 · The paper itself

Abstract

Terminal RNA uridylyltransferases (TUTases) are functionally and structurally diverse nucleotidyl transferases that catalyze template-independent 3' uridylylation of RNAs. Within the DNA polymerase beta-type superfamily, TUTases are closely related to non-canonical poly(A) polymerases. Studies of U-insertion/deletion RNA editing in mitochondria of trypanosomatids identified the first TUTase proteins and their cellular functions: post-transcriptional uridylylation of guide RNAs by RNA editing TUTase 1 (RET1) and U-insertion mRNA editing by RNA editing TUTase 2 (RET2). The editing TUTases possess conserved catalytic and nucleotide base recognition domains, yet differ in quaternary structure, substrate specificity and processivity. The cytosolic TUTases TUT3 and TUT4 have also been identified in trypanosomes but their biological roles remain to be established. Structural analyses have revealed a mechanism of cognate nucleoside triphosphate selection by TUTases, which includes protein-UTP contacts as well as contribution of the RNA substrate. This review focuses on biological functions and structures of trypanosomal TUTases.

Indexed as

AnimalsMitochondriaMitochondrial ProteinsPolyribonucleotide NucleotidyltransferasePoly UProtein Structure, TertiaryProtozoan ProteinsRNARNA EditingRNA, MitochondrialRNA, ProtozoanStructure-Activity RelationshipSubstrate SpecificityTrypanosomaUridine TriphosphateMitochondrial ProteinsPolyribonucleotide NucleotidyltransferasePoly UProtozoan ProteinsRNARNA, MitochondrialRNA, ProtozoanUridine Triphosphate

Identifiers

PMID18191648
PMCPMC2364610

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.