Evidence map›Paper›PMID 18190973›Full record

ReviewTrends in pharmacological sciences2008

Novel paradigms for drug discovery: computational multitarget screening.

Ekachai Jenwitheesuk, Jeremy A Horst, Kasey L Rivas, Wesley C Van Voorhis, Ram Samudrala

Abstract readReview
In one paragraph

Review in Trends in pharmacological sciences, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  12. Novel Therapies inKidney international reports · 2023
    Review
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  20. A Deep-Learning Proteomic-Scale Approach for Drug Design.Pharmaceuticals (Basel, Switzerland) · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Ekachai JenwitheesukDepartment of Microbiology, School of Medicine, University of Washington, Box 357242, Seattle, WA 98195, USA.
Jeremy A Horst
Kasey L Rivas
Wesley C Van Voorhis
Ram Samudrala

Funding

Protein structure from theory and experimentR33GM068152 · NIGMS · UNIVERSITY OF WASHINGTON · PI SAMUDRALA, RAM · 2003 to 2005
$901k
Individual Predoctoral Dental Scientist FellowshipF30DE017522 · NIDCR · UNIVERSITY OF WASHINGTON · PI HORST, JEREMY ALAN · 2006 to 2010
$173k
NIDCR NIH HHS F30 DE017522NIDCR NIH HHS F30DE017522NIGMS NIH HHS GM068152NIGMS NIH HHS R33 GM068152
6 · The paper itself

Abstract

An established paradigm in current drug development is (i) to identify a single protein target whose inhibition is likely to result in the successful treatment of a disease of interest; (ii) to assay experimentally large libraries of small-molecule compounds in vitro and in vivo to identify promising inhibitors in model systems; and (iii) to determine whether the findings are extensible to humans. This complex process, which is largely based on trial and error, is risk-, time- and cost-intensive. Computational (virtual) screening of drug-like compounds simultaneously against the atomic structures of multiple protein targets, taking into account protein-inhibitor dynamics, might help to identify lead inhibitors more efficiently, particularly for complex drug-resistant diseases. Here we discuss the potential benefits of this approach, using HIV-1 and Plasmodium falciparum infections as examples. We propose a virtual drug discovery 'pipeline' that will not only identify lead inhibitors efficiently, but also help minimize side-effects and toxicity, thereby increasing the likelihood of successful therapies.

Indexed as

Drug DesignAnimalsAnti-HIV AgentsAntimalarialsComputational BiologyComputer SimulationDrug Delivery SystemsHIV-1HumansPlasmodium falciparumAnti-HIV AgentsAntimalarials

Identifiers

PMID18190973
PMCPMC4551513

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.