Evidence map›Paper›PMID 18187411›Full record

ArticleThe Journal of biological chemistry2008

Metabolic regulation of manganese superoxide dismutase expression via essential amino acid deprivation.

Kimberly J Aiken, Justin S Bickford, Michael S Kilberg, Harry S Nick

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 14 citations in OpenAlex.

  1. Review
  2. Effect of allergy and inflammation on eicosanoid gene expression in CFTR deficiency.Journal of cystic fibrosis : official journal of the European Cystic Fibrosis Society · 2013
    Article
  3. Review
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Kimberly J AikenDepartment of Neuroscience, McKnight Brain Institute, Department of Biochemistry and Molecular Biology, University of Florida, Gainesville, Florida 32610, USA.
Justin S Bickford
Michael S Kilberg
Harry S Nick
University of Florida · US

Funding

NUTRITIONAL CONTROL OF ASPARAGINE SYNTHETASER01DK052064 · NIDDK · UNIVERSITY OF FLORIDA · PI KILBERG, MICHAEL S. · 1997 to 2010
$3.4M
REGULATION OF SUPEROXIDE DISMUTASES IN THE LUNGR01HL039593 · NHLBI · UNIVERSITY OF FLORIDA · PI NICK, HARRY S · 1987 to 2006
$2.1M
Nutritional Control of Transcription Factor ExpressionR01DK070647 · NIDDK · UNIVERSITY OF FLORIDA · PI KILBERG, MICHAEL S. · 2006 to 2010
$1.4M
NHLBI NIH HHS HL06745NHLBI NIH HHS HL39593NIDDK NIH HHS DK52064NIDDK NIH HHS DK70647NIDDK NIH HHS R01 DK052064NIDDK NIH HHS R01 DK070647
6 · The paper itself

Abstract

Organisms respond to available nutrient levels by rapidly adjusting metabolic flux, in part through changes in gene expression. A consequence of adaptations in metabolic rate is the production of mitochondria-derived reactive oxygen species. Therefore, we hypothesized that nutrient sensing could regulate the synthesis of the primary defense of the cell against superoxide radicals, manganese superoxide dismutase. Our data establish a novel nutrient-sensing pathway for manganese superoxide dismutase expression mediated through essential amino acid depletion concurrent with an increase in cellular viability. Most relevantly, our results are divergent from current mechanisms governing amino acid-dependent gene regulation. This pathway requires the presence of glutamine, signaling via the tricarboxylic acid cycle/electron transport chain, an intact mitochondrial membrane potential, and the activity of both the MEK/ERK and mammalian target of rapamycin kinases. Our results provide evidence for convergence of metabolic cues with nutrient control of antioxidant gene regulation, revealing a potential signaling strategy that impacts free radical-mediated mutations with implications in cancer and aging.

Indexed as

Gene Expression Regulation, EnzymologicAmino AcidsCell LineCell SurvivalElectronsExtracellular Signal-Regulated MAP KinasesGlutamineHumansMAP Kinase Kinase KinasesMitochondriaModels, BiologicalReactive Oxygen SpeciesSuperoxide DismutaseSuperoxidesTranscription, GeneticAmino AcidsExtracellular Signal-Regulated MAP KinasesGlutamineMAP Kinase Kinase KinasesReactive Oxygen SpeciesSuperoxide DismutaseSuperoxides

Identifiers

PMID18187411
PMCPMC2447627
OpenAlexW2040307459

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.