Evidence map›Paper›PMID 18181119›Full record

ArticleChemMedChem2008

Zinc-binding groups modulate selective inhibition of MMPs.

Arpita Agrawal, Diego Romero-Perez, Jennifer A Jacobsen, Francisco J Villarreal, Seth M Cohen

Open access · greenAbstract read
In one paragraph

Article in ChemMedChem, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 66 papers.

0numbers the graph read from it
0cells of the map it votes in
66citing papers in PubMed
6.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

66 citing papers in PubMed, 140 citations in OpenAlex.

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6 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Arpita AgrawalDepartment of Chemistry and Biochemistry, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA 92093, USA.
Diego Romero-Perez
Jennifer A Jacobsen
Francisco J Villarreal
Seth M Cohen
University of California, San Diego · US

Funding

Molecular biology and mechanics of the cardiac interstitiumR01HL043617 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI VILLARREAL, FRANCISCO J · 1989 to 2011
$3.5M
Translational Development of Novel MMP InhibitorsR01HL080049 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI COHEN, SETH M · 2006 to 2010
$1.9M
NHLBI NIH HHS HL080049-01NHLBI NIH HHS HL-43617NHLBI NIH HHS R01 HL043617NHLBI NIH HHS R01 HL080049
6 · The paper itself

Abstract

The need for selective matrix metalloproteinase (MMP) inhibition is of interest because of the range of pathologies mediated by different MMP isoforms. The development of more selective MMP inhibitors (MMPi) may help to overcome some of the undesired side effects that have hindered the clinical success of these compounds. In an effort to devise new approaches to selective inhibitors, herein we describe several novel MMPi and show that their selectivity is dependent on the nature of the zinc-binding group (ZBG). This is in contrast to most current MMPi, which obtain isoform selectivity solely from the peptidomimetic backbone portion of the compound. In the present study, six different hydroxypyrone and hydroxypyridinone ZBGs were appended to a common biphenyl backbone and the inhibition efficiency of each inhibitor was determined in vitro (IC(50) values) against MMP-1, -2, -3, -7, -8, -9, -12, and -13. The results show that the selectivity profile of each inhibitor is different as a result of the various ZBGs. Computational modeling studies were used to explain some trends in the observed selectivity profiles. To assess the importance of the ZBG in a biological model, two of the semiselective, potent MMPi (and one control) were evaluated using an isolated perfused rat heart system. Hearts were subjected to ischemia reperfusion injury, and recovery of contractile function was examined. In this model, only one of the two MMPi showed significant and sustained heart recovery, demonstrating that the choice of ZBG can have a significant effect in a relevant pathophysiological endpoint.

Indexed as

Matrix Metalloproteinase InhibitorsAnimalsMaleMatrix MetalloproteinasesMyocardial Reperfusion InjuryProtease InhibitorsRatsRats, Sprague-DawleyStructure-Activity RelationshipZincMatrix Metalloproteinase InhibitorsMatrix MetalloproteinasesProtease InhibitorsZinc

Identifiers

PMID18181119
PMCPMC2836234
OpenAlexW2137272233

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.