Evidence map›Paper›PMID 18179891›Full record

ArticleAmerican journal of human genetics2008

Mutations of ESRRB encoding estrogen-related receptor beta cause autosomal-recessive nonsyndromic hearing impairment DFNB35.

Rob W J Collin, Ersan Kalay, Muhammad Tariq, Theo Peters, Bert van der Zwaag, Hanka Venselaar, Jaap Oostrik, Kwanghyuk Lee, Zubair M Ahmed, Refik Caylan and 19 more

Open access · bronzeAbstract read
In one paragraph

Article in American journal of human genetics, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 71 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
71citing papers in PubMed, 1 pooled it
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

71 citing papers in PubMed, 1 synthesis or guideline pooled it, 128 citations in OpenAlex.

  1. Pooled it
  2. Article
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  6. Review
  7. Article
  8. Review
  9. The Shepherd and the Hunter: A Genomic Comparison of Italian Dog Breeds.Animals : an open access journal from MDPI · 2023
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  14. ARNSHL gene identification: past, present and future.Molecular genetics and genomics : MGG · 2022
    Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

11 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

29 authors at 11 institutions in 5 countries.

Rob W J CollinDepartment of Otorhinolaryngology, Radboud University Nijmegen Medical Centre, 6525 GA Nijmegen, The Netherlands.
Ersan Kalay
Muhammad Tariq
Theo Peters
Bert van der Zwaag
Hanka Venselaar
Jaap Oostrik
Kwanghyuk Lee
Zubair M Ahmed
Refik Caylan
Yun Li
Henk A Spierenburg
Erol Eyupoglu
Angelien Heister
Saima Riazuddin
Elif Bahat
Muhammad Ansar
Selcuk Arslan
Bernd Wollnik
Han G Brunner
Cor W R J Cremers
Ahmet Karaguzel
Wasim Ahmad
Frans P M Cremers
Gert Vriend
Thomas B Friedman
Sheikh Riazuddin
Suzanne M Leal
Hannie Kremer
Radboud University Nijmegen · NLKaradeniz Technical University · TRRadboud University Medical Center · NLNational Institute on Deafness and Other Communication Disorders · USBaylor College of Medicine · USQuaid-i-Azam University · PKUniversity Medical Center Utrecht · NLUniversity of Cologne · DECentre of Excellence in Molecular Biology · PKOrdu University · TRUniversity of the Punjab · PK

Funding

Identification of Nonsyndromic Hearing Impairment GenesR01DC003594 · NIDCD · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI SUZANNE M LEAL · 2004 to 2026
$7.7M
Identification of Genes Causing Syndromic And Nonsyndromic Hearing ImpairmentZ01DC000039 · NIDCD · NATIONAL INSTITUTE ON DEAFNESS AND OTHER COMMUNICATION DISORDERS · PI FRIEDMAN, THOMAS BAER · 1997 to 2008
$7.2M
GENOTYPING FOR LOCATING HUMAN DISEASE GENESN01HG065403 · NHGRI · JOHNS HOPKINS UNIVERSITY · PI VALLE, DAVID L · 1996 to 2000
$1.7M
ISOLATION OF NON SYNDROMIC HEARING LOSS GENESR29DC003594 · NIDCD · ROCKEFELLER UNIVERSITY · PI LEAL, SUZANNE MARGARET · 1998 to 2002
$345k
MAPPING AND CLONING HEREDITARY HEARING IMPAIRMENT GENESZ01DC000035 · NIDCD · DEAFNESS &OTHER COMMUNICATION DISORDERS · PI WILCOX, EDWARD R. · 1997 to 2002
–
Intramural NIH HHS Z01 DC000035NHGRI NIH HHS N01 HG065403NIDCD NIH HHS 1 Z01 DC000035-10NIDCD NIH HHS DC03594NIDCD NIH HHS R01 DC003594NIDCD NIH HHS R29 DC003594
6 · The paper itself

Abstract

In a large consanguineous family of Turkish origin, genome-wide homozygosity mapping revealed a locus for recessive nonsyndromic hearing impairment on chromosome 14q24.3-q34.12. Fine mapping with microsatellite markers defined the critical linkage interval to a 18.7 cM region flanked by markers D14S53 and D14S1015. This region partially overlapped with the DFNB35 locus. Mutation analysis of ESRRB, a candidate gene in the overlapping region, revealed a homozygous 7 bp duplication in exon 8 in all affected individuals. This duplication results in a frame shift and premature stop codon. Sequence analysis of the ESRRB gene in the affected individuals of the original DFNB35 family and in three other DFNB35-linked consanguineous families from Pakistan revealed four missense mutations. ESRRB encodes the estrogen-related receptor beta protein, and one of the substitutions (p.A110V) is located in the DNA-binding domain of ESRRB, whereas the other three are substitutions (p.L320P, p.V342L, and p.L347P) located within the ligand-binding domain. Molecular modeling of this nuclear receptor showed that the missense mutations are likely to affect the structure and stability of these domains. RNA in situ hybridization in mice revealed that Esrrb is expressed during inner-ear development, whereas immunohistochemical analysis showed that ESRRB is present postnatally in the cochlea. Our data indicate that ESRRB is essential for inner-ear development and function. To our knowledge, this is the first report of pathogenic mutations of an estrogen-related receptor gene.

Indexed as

Amino Acid SequenceChromosomes, Human, Pair 14DNA Mutational AnalysisEar, InnerFemaleGene DuplicationGenes, RecessiveGenetic LinkageHearing LossHumansMaleMicrosatellite RepeatsModels, MolecularMolecular Sequence DataMutation, MissensePedigreeESRRB protein, humanProtein IsoformsReceptors, Cytoplasmic and NuclearReceptors, Estrogen

Identifiers

PMID18179891
PMCPMC2253958
OpenAlexW2008800274

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.