Evidence map›Paper›PMID 18173371›Full record

ReviewAnnual review of biochemistry2008

Cellular defenses against superoxide and hydrogen peroxide.

James A Imlay

Abstract readReview
In one paragraph

Review in Annual review of biochemistry, 2008. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 705 papers.

0numbers the graph read from it
0cells of the map it votes in
705citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

705 citing papers in PubMed.

  1. Review
  2. S267P mutation of OxyR regulator inSynthetic and systems biotechnology · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. A Novel Indigoidine-like NRPS Gene fromAntioxidants (Basel, Switzerland) · 2026
    Article
  8. Review
  9. The potential role of HNature communications · 2026
    Article
  10. Article
  11. Detoxification of host-relevant HbioRxiv : the preprint server for biology · 2026
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. CaNeurochemical research · 2026
    Article
  17. Article
  18. Proteoforms as the true units of physiological function.European journal of applied physiology · 2026
    Review
  19. Review
  20. Article

645 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author.

James A ImlayDepartment of Microbiology, University of Illinois, Urbana, IL 61801, USA. jimlay@uiuc.edu

Funding

The Physiology of Oxidative Stress in Escherichia coliR01GM049640 · NIGMS · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI IMLAY, JAMES A. · 1994 to 2024
$6.9M
The Physiology of Oxidative Stress in Escherichia coliR37GM049640 · NIGMS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI IMLAY, JAMES A. · 2007 to 2016
$5.3M
NIGMS NIH HHS GM 49640NIGMS NIH HHS R01 GM049640NIGMS NIH HHS R37 GM049640
6 · The paper itself

Abstract

Life evolved in an anaerobic world; therefore, fundamental enzymatic mechanisms and biochemical pathways were refined and integrated into metabolism in the absence of any selective pressure to avoid reactivity with oxygen. After photosystem II appeared, environmental oxygen levels rose very slowly. During this time, microorganisms acquired oxygen tolerance by jettisoning enzymes that use glycyl radicals and exposed low-potential iron-sulfur clusters, which can be directly poisoned by oxygen. They also developed mechanisms to defend themselves against superoxide (O(2)()) and hydrogen peroxide, partially reduced oxygen species that are generated as inadvertent by-products of aerobic metabolism. Contemporary organisms have inherited both the vulnerabilities and the defenses of these ancestral microbes. Current research seeks to identify these, and bacteria comprise an exceptionally accessible experimental system that has provided many of the answers. This manuscript reviews recent developments and identifies remaining puzzles.

Indexed as

Bacterial Physiological PhenomenaBacterial ProteinsDNADNA-Binding ProteinsEscherichia coli ProteinsHydrogen PeroxideHydroxyl RadicalIronModels, BiologicalModels, ChemicalOxidative StressOxygenReactive Oxygen SpeciesRepressor ProteinsSuperoxidesTranscription FactorsBacterial ProteinsDNADNA-Binding ProteinsEscherichia coli ProteinsFenton's reagentHydrogen PeroxideHydroxyl RadicalIronOxygenoxyR protein, E coliperoxide repressor proteinsReactive Oxygen SpeciesRepressor ProteinsSoxR protein, BacteriaSuperoxidesTranscription Factors

Identifiers

PMID18173371
PMCPMC3057177

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.